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Fig. 2 | Biotechnology for Biofuels

Fig. 2

From: Whole-genome de novo sequencing, combined with RNA-Seq analysis, reveals unique genome and physiological features of the amylolytic yeast Saccharomycopsis fibuligera and its interspecies hybrid

Fig. 2

Phylogenetic and evolutionary analysis of S. fibuligera genomes in the phylum Ascomycota. a Phylogenetic tree analysis of KPH12 and KJJ81 based on genome sequence. A phylogenetic tree was constructed using MEGA6 [39] with other members of the phylum Ascomycota, which is composed of three major subphyla, Pezizzomycotina, Saccharomycotina, and Taphrinomycotina. A total of 55 orthologous genes were selected from among 12 ascomycete fungal species, including A. gossypii, K. lactis, C. glabrata, S. cerevisiae, C. lusitaniae, C. tropicalis, D. hansenii, Y. lipolytica, A. fumigatus, A. oryzae, and S. pombe. WGD whole-genome duplication event that occurred in a Saccharomyces species ancestor. b Expansion and contraction of protein families among the ascomycete fungal species, analyzed using the Pfam protein families database [84]

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