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Table 1 Detected protein spots and differences between samples

From: Metaproteomics-guided selection of targeted enzymes for bioprospecting of mixed microbial communities

Sample

Amount (mg)a

Number of spots

Diff.

Match rate 1 (%)b

Match rate 2 (%)c

New or 2 times upregulatedd

New or 2 times upregulatede

Ind96 h

1.42

525

 

99

58

  

Ref96 h

0.74

484

41

97

53

62

21

Ind24 h

0.52

337

188

97

37

54

  1. aFrom 100 ml cell suspension supernatant concentrated to 10 ml
  2. bMatch rate 1 denotes the ability to find spots on the constructed master gel also in an individual gel and gives an indication of the quality of the gels and gel matching
  3. cMatch rate 2 denotes the percentage of matched spots on an individual gel relative to the total number of spots on the master gel
  4. dInd96 h compared to the respective reference
  5. eInd96 h compared to both references combined