TY - JOUR AU - Qiu, H. G. AU - Huang, J. K. AU - Keyzer, M. AU - Veen, W. AU - Rozelle, S. AU - Fisher, G. PY - 2011 DA - 2011// TI - Biofuel development, food security and the use of Marginal land in China JO - J Environ Qual VL - 40 UR - https://doi.org/10.2134/jeq2011.0012 DO - 10.2134/jeq2011.0012 ID - Qiu2011 ER - TY - JOUR AU - Ragauskas, A. J. AU - Williams, C. K. AU - Davison, B. H. AU - Britovsek, G. AU - Cairney, J. AU - Eckert, C. A. PY - 2006 DA - 2006// TI - The path forward for biofuels and biomaterials JO - Science VL - 311 UR - https://doi.org/10.1126/science.1114736 DO - 10.1126/science.1114736 ID - Ragauskas2006 ER - TY - JOUR AU - Sun, Y. AU - Cheng, J. Y. PY - 2002 DA - 2002// TI - Hydrolysis of lignocellulosic materials for ethanol production: a review JO - Biores Technol VL - 83 UR - https://doi.org/10.1016/S0960-8524(01)00212-7 DO - 10.1016/S0960-8524(01)00212-7 ID - Sun2002 ER - TY - JOUR AU - Cui, W. AU - Cheng, J. J. PY - 2015 DA - 2015// TI - Growing duckweed for biofuel production: a review JO - Plant Biol (Stuttg) VL - 17 UR - https://doi.org/10.1111/plb.12216 DO - 10.1111/plb.12216 ID - Cui2015 ER - TY - JOUR AU - Bog, M. AU - Baumbach, H. AU - Schween, U. AU - Hellwig, F. AU - Landolt, E. AU - Appenroth, K. J. PY - 2010 DA - 2010// TI - Genetic structure of the genus Lemna L. (Lemnaceae) as revealed by amplified fragment length polymorphism JO - Planta VL - 232 UR - https://doi.org/10.1007/s00425-010-1201-2 DO - 10.1007/s00425-010-1201-2 ID - Bog2010 ER - TY - JOUR AU - Xu, J. L. AU - Cui, W. H. AU - Cheng, J. J. AU - Stomp, A. M. PY - 2011 DA - 2011// TI - Production of high-starch duckweed and its conversion to bioethanol JO - Biosyst Eng VL - 110 UR - https://doi.org/10.1016/j.biosystemseng.2011.06.007 DO - 10.1016/j.biosystemseng.2011.06.007 ID - Xu2011 ER - TY - JOUR AU - Xiao, Y. AU - Fang, Y. AU - Jin, Y. L. AU - Zhang, G. H. AU - Zhao, H. PY - 2013 DA - 2013// TI - Culturing duckweed in the field for starch accumulation JO - Ind Crop Prod VL - 48 UR - https://doi.org/10.1016/j.indcrop.2013.04.017 DO - 10.1016/j.indcrop.2013.04.017 ID - Xiao2013 ER - TY - JOUR AU - Cheng, J. J. AU - Stomp, A. M. PY - 2009 DA - 2009// TI - Growing duckweed to recover nutrients from wastewaters and for production of fuel ethanol and animal feed JO - Clean Soil Air Water VL - 37 UR - https://doi.org/10.1002/clen.200800210 DO - 10.1002/clen.200800210 ID - Cheng2009 ER - TY - JOUR AU - Reid, M. S. AU - Bieleski, R. L. PY - 1970 DA - 1970// TI - Response of Spirodela oligorrhiza to phosphorus deficiency JO - Plant Physiol VL - 46 UR - https://doi.org/10.1104/pp.46.4.609 DO - 10.1104/pp.46.4.609 ID - Reid1970 ER - TY - JOUR AU - Sree, K. S. AU - Adelmann, K. AU - Garcia, C. AU - Lam, E. AU - Appenroth, K. J. PY - 2015 DA - 2015// TI - Natural variance in salt tolerance and induction of starch accumulation in duckweeds JO - Planta VL - 241 UR - https://doi.org/10.1007/s00425-015-2264-x DO - 10.1007/s00425-015-2264-x ID - Sree2015 ER - TY - JOUR AU - Wang, W. AU - Kerstetter, R. A. AU - Michael, T. P. PY - 2011 DA - 2011// TI - Evolution of genome size in duckweeds (Lemnaceae) JO - J Bot VL - 2011 UR - https://doi.org/10.1155/2011/570319 DO - 10.1155/2011/570319 ID - Wang2011 ER - TY - JOUR AU - Upadhyay, S. AU - Phukan, U. J. AU - Mishra, S. AU - Shukla, R. K. PY - 2014 DA - 2014// TI - De novo leaf and root transcriptome analysis identified novel genes involved in steroidal sapogenin biosynthesis in Asparagus racemosus JO - BMC Genom VL - 15 UR - https://doi.org/10.1186/1471-2164-15-746 DO - 10.1186/1471-2164-15-746 ID - Upadhyay2014 ER - TY - JOUR AU - Zhang, M. AU - Kong, X. AU - Xu, X. AU - Li, C. AU - Tian, H. AU - Ding, Z. PY - 2015 DA - 2015// TI - Comparative transcriptome profiling of the maize primary, crown and seminal root in response to salinity stress JO - PLoS ONE VL - 10 UR - https://doi.org/10.1371/journal.pone.0121222 DO - 10.1371/journal.pone.0121222 ID - Zhang2015 ER - TY - JOUR AU - Tao, X. AU - Fang, Y. AU - Xiao, Y. AU - Jin, Y. L. AU - Ma, X. R. AU - Zhao, Y. PY - 2013 DA - 2013// TI - Comparative transcriptome analysis to investigate the high starch accumulation of duckweed (Landoltia punctata) under nutrient starvation JO - Biotechnol Biofuels VL - 6 UR - https://doi.org/10.1186/1754-6834-6-72 DO - 10.1186/1754-6834-6-72 ID - Tao2013 ER - TY - JOUR AU - Wang, W. Q. AU - Wu, Y. R. AU - Messing, J. PY - 2014 DA - 2014// TI - RNA-Seq transcriptome analysis of Spirodela dormancy without reproduction JO - Bmc Genomics VL - 15 UR - https://doi.org/10.1186/1471-2164-15-60 DO - 10.1186/1471-2164-15-60 ID - Wang2014 ER - TY - JOUR AU - Hoeck, A. AU - Horemans, N. AU - Nauts, R. AU - Hees, M. AU - Vandenhove, H. AU - Blust, R. PY - 2017 DA - 2017// TI - Lemna minor plants chronically exposed to ionising radiation: RNA-seq analysis indicates a dose rate dependent shift from acclimation to survival strategies JO - Plant Sci VL - 257 UR - https://doi.org/10.1016/j.plantsci.2017.01.010 DO - 10.1016/j.plantsci.2017.01.010 ID - Hoeck2017 ER - TY - JOUR AU - Yu, C. AU - Sun, C. AU - Yu, L. AU - Zhu, M. AU - Xu, H. AU - Zhao, J. PY - 2014 DA - 2014// TI - Comparative analysis of duckweed cultivation with sewage water and SH media for production of fuel ethanol JO - PLoS ONE VL - 9 UR - https://doi.org/10.1371/journal.pone.0115023 DO - 10.1371/journal.pone.0115023 ID - Yu2014 ER - TY - JOUR AU - Wang, W. AU - Messing, J. PY - 2012 DA - 2012// TI - Analysis of ADP-glucose pyrophosphorylase expression during turion formation induced by abscisic acid in Spirodela polyrhiza (greater duckweed) JO - BMC Plant Biol VL - 12 UR - https://doi.org/10.1186/1471-2229-12-5 DO - 10.1186/1471-2229-12-5 ID - Wang2012 ER - TY - JOUR AU - Grabherr, M. G. AU - Haas, B. J. AU - Yassour, M. AU - Levin, J. Z. AU - Thompson, D. A. AU - Amit, I. PY - 2011 DA - 2011// TI - Full-length transcriptome assembly from RNA-Seq data without a reference genome JO - Nat Biotechnol VL - 29 UR - https://doi.org/10.1038/nbt.1883 DO - 10.1038/nbt.1883 ID - Grabherr2011 ER - TY - JOUR AU - Pertea, G. AU - Huang, X. AU - Liang, F. AU - Antonescu, V. AU - Sultana, R. AU - Karamycheva, S. PY - 2003 DA - 2003// TI - TIGR gene indices clustering tools (TGICL): a software system for fast clustering of large EST datasets JO - Bioinformatics VL - 19 UR - https://doi.org/10.1093/bioinformatics/btg034 DO - 10.1093/bioinformatics/btg034 ID - Pertea2003 ER - TY - JOUR AU - Li, B. AU - Dewey, C. N. PY - 2011 DA - 2011// TI - RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome JO - BMC Bioinformatics VL - 12 UR - https://doi.org/10.1186/1471-2105-12-323 DO - 10.1186/1471-2105-12-323 ID - Li2011 ER - TY - JOUR AU - Anders, S. AU - Huber, W. PY - 2010 DA - 2010// TI - Differential expression analysis for sequence count data JO - Genome Biol VL - 11 UR - https://doi.org/10.1186/gb-2010-11-10-r106 DO - 10.1186/gb-2010-11-10-r106 ID - Anders2010 ER - TY - JOUR AU - Young, M. D. AU - Wakefield, M. J. AU - Smyth, G. K. AU - Oshlack, A. PY - 2010 DA - 2010// TI - Gene ontology analysis for RNA-seq: accounting for selection bias JO - Genome Biol VL - 11 UR - https://doi.org/10.1186/gb-2010-11-2-r14 DO - 10.1186/gb-2010-11-2-r14 ID - Young2010 ER - TY - JOUR AU - Xie, C. AU - Mao, X. AU - Huang, J. AU - Ding, Y. AU - Wu, J. AU - Dong, S. PY - 2011 DA - 2011// TI - KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases JO - Nucleic Acids Res VL - 39 UR - https://doi.org/10.1093/nar/gkr483 DO - 10.1093/nar/gkr483 ID - Xie2011 ER - TY - JOUR AU - Schmittgen, T. D. AU - Livak, K. J. PY - 2008 DA - 2008// TI - Analyzing real-time PCR data by the comparative C(T) method JO - Nat Protoc VL - 3 UR - https://doi.org/10.1038/nprot.2008.73 DO - 10.1038/nprot.2008.73 ID - Schmittgen2008 ER - TY - JOUR AU - Crumpton-Taylor, M. AU - Pike, M. AU - Lu, K. J. AU - Hylton, C. M. AU - Feil, R. AU - Eicke, S. PY - 2013 DA - 2013// TI - Starch synthase 4 is essential for coordination of starch granule formation with chloroplast division during Arabidopsis leaf expansion JO - New Phytol VL - 200 UR - https://doi.org/10.1111/nph.12455 DO - 10.1111/nph.12455 ID - Crumpton-Taylor2013 ER - TY - JOUR AU - Tarrago, J. F. AU - Nicolas, G. PY - 1976 DA - 1976// TI - Starch degradation in the cotyledons of germinating lentils JO - Plant Physiol VL - 58 UR - https://doi.org/10.1104/pp.58.5.618 DO - 10.1104/pp.58.5.618 ID - Tarrago1976 ER - TY - JOUR AU - Nakamura, H. AU - Yuasa, I. AU - Umetsu, K. AU - Nakagawa, M. AU - Nanba, E. AU - Kimura, K. PY - 2000 DA - 2000// TI - The rearrangement of the human alpha(1)-acid glycoprotein/orosomucoid gene: evidence for tandemly triplicated genes consisting of two AGP1 and one AGP2 JO - Biochem Biophys Res Commun VL - 276 UR - https://doi.org/10.1006/bbrc.2000.3522 DO - 10.1006/bbrc.2000.3522 ID - Nakamura2000 ER - TY - JOUR AU - Jenner, C. F. AU - Denyer, K. AU - Hawker, J. S. PY - 1994 DA - 1994// TI - Caution on the use of the generally accepted methanol precipitation technique for the assay of soluble starch synthase in crude extracts of plant-tissues JO - Aust J Plant Physiol VL - 21 UR - https://doi.org/10.1071/PP9940017 DO - 10.1071/PP9940017 ID - Jenner1994 ER - TY - JOUR AU - Hedhly, A. AU - Vogler, H. AU - Schmid, M. W. AU - Pazmino, D. AU - Gagliardini, V. AU - Santelia, D. PY - 2016 DA - 2016// TI - Starch turnover and metabolism during flower and early embryo development JO - Plant Physiol VL - 172 UR - https://doi.org/10.1104/pp.16.00916 DO - 10.1104/pp.16.00916 ID - Hedhly2016 ER - TY - JOUR AU - Li, M. AU - Chen, T. AU - Gao, T. AU - Miao, Z. AU - Jiang, A. AU - Shi, L. PY - 2015 DA - 2015// TI - UDP-glucose pyrophosphorylase influences polysaccharide synthesis, cell wall components, and hyphal branching in Ganoderma lucidum via regulation of the balance between glucose-1-phosphate and UDP-glucose JO - Fungal Genet Biol VL - 82 UR - https://doi.org/10.1016/j.fgb.2015.07.012 DO - 10.1016/j.fgb.2015.07.012 ID - Li2015 ER - TY - JOUR AU - Smith, A. M. PY - 2012 DA - 2012// TI - Starch in the Arabidopsis plant JO - Starch-Starke VL - 64 UR - https://doi.org/10.1002/star.201100163 DO - 10.1002/star.201100163 ID - Smith2012 ER - TY - JOUR AU - Siaut, M. AU - Cuine, S. AU - Cagnon, C. AU - Fessler, B. AU - Nguyen, M. AU - Carrier, P. PY - 2011 DA - 2011// TI - Oil accumulation in the model green alga Chlamydomonas reinhardtii: characterization, variability between common laboratory strains and relationship with starch reserves JO - BMC Biotechnol VL - 11 UR - https://doi.org/10.1186/1472-6750-11-7 DO - 10.1186/1472-6750-11-7 ID - Siaut2011 ER - TY - JOUR AU - Wase, N. AU - Black, P. N. AU - Stanley, B. A. AU - DiRusso, C. C. PY - 2014 DA - 2014// TI - Integrated quantitative analysis of nitrogen stress response in Chlamydomonas reinhardtii using metabolite and protein profiling JO - J Proteome Res VL - 13 UR - https://doi.org/10.1021/pr400952z DO - 10.1021/pr400952z ID - Wase2014 ER - TY - JOUR AU - Yan, Y. AU - Candreva, J. AU - Shi, H. AU - Ernst, E. AU - Martienssen, R. AU - Schwender, J. PY - 2013 DA - 2013// TI - Survey of the total fatty acid and triacylglycerol composition and content of 30 duckweed species and cloning of a Delta6-desaturase responsible for the production of gamma-linolenic and stearidonic acids in Lemna gibba JO - BMC Plant Biol VL - 13 UR - https://doi.org/10.1186/1471-2229-13-201 DO - 10.1186/1471-2229-13-201 ID - Yan2013 ER - TY - JOUR AU - Liu, Y. AU - Fang, Y. AU - Huang, M. AU - Jin, Y. AU - Sun, J. AU - Tao, X. PY - 2015 DA - 2015// TI - Uniconazole-induced starch accumulation in the bioenergy crop duckweed (Landoltia punctata) II: transcriptome alterations of pathways involved in carbohydrate metabolism and endogenous hormone crosstalk JO - Biotechnol Biofuels VL - 8 UR - https://doi.org/10.1186/s13068-015-0245-8 DO - 10.1186/s13068-015-0245-8 ID - Liu2015 ER - TY - JOUR AU - Liu, Y. AU - Fang, Y. AU - Huang, M. AU - Jin, Y. AU - Sun, J. AU - Tao, X. PY - 2015 DA - 2015// TI - Uniconazole-induced starch accumulation in the bioenergy crop duckweed (Landoltia punctata) I: transcriptome analysis of the effects of uniconazole on chlorophyll and endogenous hormone biosynthesis JO - Biotechnol Biofuels VL - 8 UR - https://doi.org/10.1186/s13068-015-0246-7 DO - 10.1186/s13068-015-0246-7 ID - Liu2015 ER - TY - JOUR AU - Tao, X. AU - Fang, Y. AU - Xiao, Y. AU - Jin, Y. L. AU - Ma, X. R. AU - Zhao, Y. PY - 2013 DA - 2013// TI - Comparative transcriptome analysis to investigate the high starch accumulation of duckweed (Landoltia punctata) under nutrient starvation JO - Biotechnol Biofuels VL - 6 UR - https://doi.org/10.1186/1754-6834-6-72 DO - 10.1186/1754-6834-6-72 ID - Tao2013 ER - TY - JOUR AU - Hirai, M. Y. AU - Yano, M. AU - Goodenowe, D. B. AU - Kanaya, S. AU - Kimura, T. AU - Awazuhara, M. PY - 2004 DA - 2004// TI - Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana JO - Proc Natl Acad Sci USA VL - 101 UR - https://doi.org/10.1073/pnas.0403218101 DO - 10.1073/pnas.0403218101 ID - Hirai2004 ER -