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Table 1 Metatranscriptome sequencing and processing metrics

From: Targeted metatranscriptomics of compost-derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity

  Week 1 Week 2 Week 3 Week 4 Week 5 Total
Total reads generated 20,119,184 14,715,430 7,767,801 5,879,612 17,825,076 66,307,103
Reads after quality filtering 15,916,667 12,072,389 6,757,570 5,111,343 14,535,407 54,393,376
mRNA reads 12,645,050 10,652,024 3,608,818 3,971,178 11,004,487 41,881,555
Assembled transcripts 104,408 64,923 27,821 34,023 71,786 302,961
N50 947 888 789 817 858 912
Average size 963 921 820 847 884 887
Predicted open reading frames 104,425 59,885 23,156 31,198 64,692 283,356
Lignocellulose active 3012 1523 534 654 1473 7196