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Table 4 QTL and main effects for each cell wall trait

From: Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii

Trait

LG

Pos

1.5-LOD

LOD

a (SE)

D (SE)

PVE

PPD

Ash

1

61.17

56–65.2

7.73

− 0.449 (0.076)

− 0.026 (0.102)

5.55

− 31.23

Asha

3

5.08

3.5–6.9

28.88

0.847 (0.091)

− 0.198 (0.119)

26.06

58.87

Asha

3

71.11

69.7–73.8

22.17

− 0.932 (0.092)

− 0.145 (0.117)

18.57

− 64.79

Ash

4

36.48

31.4–39

5.06

0.134 (0.075)

0.493 (0.105)

3.53

9.33

Ash

5

1.63

0–4.7

9.15

0.563 (0.088)

− 0.136 (0.11)

6.67

39.16

Ash

8

47.65

42.1–50.7

13.09

0.629 (0.079)

0.132 (0.107)

9.95

43.74

Ash

9

161.45

131.5–167.1

6.57

0.379 (0.07)

− 0.092 (0.103)

4.66

26.31

Glucan

3

61.07

37–71.1

3.64

− 0.398 (0.097)

− 0.13 (0.136)

7.14

NA

Lignin

3

21.15

16.3–28.1

4.48

− 0.187 (0.054)

− 0.246 (0.074)

7.57

NA

Lignin

3

77.27

61.1–85.4

4.38

− 0.224 (0.056)

− 0.18 (0.074)

7.39

NA

Lignin

9

167.14

162.3–169.2

3.55

0.064 (0.051)

− 0.291 (0.074)

5.94

NA

Xylan

3

26.24

21.1–29.7

5.84

− 0.293 (0.059)

0.082 (0.078)

9.62

53.52

Xylan

5

6.52

0–20.4

4.80

− 0.275 (0.059)

0.049 (0.082)

7.82

50.26

Xylan

8

56.39

46–66.4

4.77

− 0.234 (0.058)

− 0.187 (0.077)

7.76

42.82

  1. LG linkage group, Pos position of QTL on LG in cM, 1.5-LOD 1.5 LOD drop confidence interval for each QTL in cM, LOD logarithm of odds score, a (SE) additive effect and standard error, D (SE) dominance deviation and standard error, PVE percent of additive variance explained by each QTL, PPD percent of parental divergence explained if applicable
  2. aEpistatic interaction