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Table 3 Differentially abundant CAZYmes in different growth conditions

From: The diversity and specificity of the extracellular proteome in the cellulolytic bacterium Caldicellulosiruptor bescii is driven by the nature of the cellulosic growth substrate

LocusTag_ProteinDescription Comparison (subA_subB)a p value subA–subB (fold changea) CBM
Athe_0610_glycoside hydrolase starch-binding CB_SWG 0.00 − 4.66 Yes
Athe_0610_glycoside hydrolase starch-binding GLU_SWG 0.00 − 3.98 Yes
Athe_0610_glycoside hydrolase starch-binding GLU_XYLN 0.00 − 4.37 Yes
Athe_0610_glycoside hydrolase starch-binding Simple_Complex 0.01 − 2.81 Yes
Athe_0610_glycoside hydrolase starch-binding CB_XYLN 0.00 − 5.04 Yes
Athe_0610_glycoside hydrolase starch-binding C6_C5 0.01 − 2.69 Yes
Athe_0460_glycoside hydrolase 94 GLU_CB 0.02 − 1.55 No
Athe_0460_glycoside hydrolase 94 XYLN_XYLO 0.00 − 2.68 No
Athe_0460_glycoside hydrolase 94 GLU_XYLN 0.00 1.41 No
Athe_0460_glycoside hydrolase 94 GLU_XYLO 0.01 − 1.27 No
Athe_0460_glycoside hydrolase 94 AVI_SWG 0.02 4.8 No
Athe_0460_glycoside hydrolase 94 AVI_XYLN 0.00 4.65 No
Athe_0460_glycoside hydrolase 94 AVI_XYLO 0.01 1.97 No
Athe_0460_glycoside hydrolase 94 AVI_CB 0.03 1.69 No
Athe_0460_glycoside hydrolase 94 CB_XYLN 0.00 2.96 No
Athe_0460_glycoside hydrolase 94 GLU_AVI 0.00 − 3.24 No
Athe_0459_glycoside hydrolase 94 AVI_SWG 0.04 4.7 No
Athe_0459_glycoside hydrolase 94 AVI_XYLN 0.04 5.96 No
Athe_0459_glycoside hydrolase 94 AVI_CB 0.01 1.54 No
Athe_0459_glycoside hydrolase 94 GLU_AVI 0.03 − 2.91 No
Athe_2028_glycoside hydrolase family 4 Simple_Complex 0.04 1.16 No
Athe_1857_glycoside hydrolase family 48 AVI_XYLN 0.03 − 1.63 Yes
Athe_1857_glycoside hydrolase family 48 AVI_XYLO 0.02 − 2.13 Yes
Athe_1857_glycoside hydrolase family 48 AVI_CB 0.03 − 2.96 Yes
Athe_1857_glycoside hydrolase family 48 Simple_Complex 0.01 1.21 Yes
Athe_1857_glycoside hydrolase family 48 GLU_AVI 0.04 1.9 Yes
Athe_0089_Endo-1,4-beta-xylanase XYLN_XYLO 0.00 5.01 Yes
Athe_0089_Endo-1,4-beta-xylanase GLU_XYLN 0.00 − 5.05 Yes
Athe_0089_Endo-1,4-beta-xylanase XYLN_SWG 0.00 5.22 Yes
Athe_0089_Endo-1,4-beta-xylanase AVI_XYLN 0.00 − 5.44 Yes
Athe_0089_Endo-1,4-beta-xylanase CB_XYLN 0.01 − 5.02 Yes
Athe_0089_Endo-1,4-beta-xylanase C6_C5 0.02 − 2.66 Yes
Athe_1860_glycoside hydrolase family 48 XYLN_XYLO 0.03 − 0.53 Yes
Athe_1860_glycoside hydrolase family 48 AVI_SWG 0.05 − 2.14 Yes
Athe_1860_glycoside hydrolase family 48 XYLN_SWG 0.05 − 0.72 Yes
Athe_1860_glycoside hydrolase family 48 AVI_XYLO 0.05 − 1.95 Yes
Athe_1860_glycoside hydrolase family 48 AVI_CB 0.05 − 2.89 Yes
Athe_1860_glycoside hydrolase family 48 Simple_Complex 0.03 1.02 Yes
Athe_0609_pullulanase, type I Simple_Complex 0.00 − 2.29 Yes
Athe_0609_pullulanase, type I C6_C5 0.03 − 1.99 Yes
Athe_0152_Acetyl xylan esterase GLU_CB 0.03 4.11 No
Athe_0152_Acetyl xylan esterase GLU_XYLN 0.03 4.03 No
Athe_0594_Cellulase Simple_Complex 0.01 − 2.05 Yes
Athe_1865_glycoside hydrolase family 9 AVI_SWG 0.04 − 1.75 Yes
Athe_1865_glycoside hydrolase family 9 AVI_XYLN 0.01 − 1.8 Yes
Athe_1865_glycoside hydrolase family 9 AVI_XYLO 0.01 − 1.81 Yes
Athe_1865_glycoside hydrolase family 9 AVI_CB 0.04 − 1.89 Yes
Athe_1865_glycoside hydrolase family 9 C6_C5 0.04 − 0.91 Yes
  1. aThe fold changes are in log scale. If the fold change is positive (+), the protein is significantly more abundant in substrate (left side) when compared substrate (right side) in the comparison column. Similarly, if the fold change is negative (−), the protein is significantly more abundant in substrate (right side) when compared substrate (left side) in the comparison column