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Table 3 Summary of mutations in evolved strains identified by whole-genome resequencing

From: Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae

Strain

Mutation

Gene

Protein functionb

Mutant allele

sSD003

D85E

GCD1

Gamma subunit of the translation initiation factor eIF2B

gcd1-1

G338C

CIT2

Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle

cit2-1

sSD006

R56C

GCD7

Beta subunit of the translation initiation factor eIF2B

gcd7-2

sSD019

D85E

GCD1

Gamma subunit of the translation initiation factor eIF2B

gcd1-1

G338C

CIT2

Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle

cit2-1

Q446a

PDR5

Plasma membrane ATP-binding cassette (ABC) transporter

pdr5-1

G135V

UBP13

Ubiquitin-specific protease

ubp13-1

S234C

LSB6

Type II phosphatidylinositol 4-kinase

lsb6-1

A662G

NST1

Protein of unknown function; mediates sensitivity to salt stress

nst1-1

Silent

COX1

Subunit I of cytochrome c oxidase (Complex IV)

cox1-1

sSD021

R56C

GCD7

Beta subunit of the translation initiation factor eIF2B

gcd7-2

D77Y

SUI2

Alpha subunit of the translation initiation factor eIF2

sui2-2

G925A

PDR5

Plasma membrane ATP-binding cassette (ABC) transporter

pdr5-2

A529E

SEY1

Dynamin-like GTPase that mediates homotypic ER fusion

sey1-2

  1. aDenotes the introduction of an early stop codon
  2. bProtein function taken from the Saccharomyces genome database website http://www.yeastgenome.org