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Table 2 Identification of genome loci in A. acidocaldarius strain DSM 446 genome that encodes putative glycoside hydrolases

From: Glycoside hydrolase gene transcription by Alicyclobacillus acidocaldarius during growth on wheat arabinoxylan and monosaccharides: a proposed xylan hydrolysis mechanism

Gene locus

Product name

Enzyme Commission number

Family

Signal sequence

Transmembrane helices

Aaci_0048

α-l-arabinofuranosidase-like protein

  

Yes (24/25)

Yes

Aaci_0060

Xylan α-1,2-glucuronosidase

EC:3.2.1.131

67

No

No

Aaci_0332

β-Glucosidase

EC:3.2.1.21

3

No

No

Aaci_0786

α-Galactosidase

EC:3.2.1.22

36

No

No

Aaci_0789

β-1,4-mannanase

EC:3.2.1.78

113

No

No

Aaci_0797

α-Galactosidase

EC:3.2.1.22

4

No

No

Aaci_0912

Amylo-α-1,6-glucosidase

EC:3.2.1.33

13

No

No

Aaci_1218

β-Galactosidase

EC:3.2.1.23

2

No

No

Aaci_1895

β-Galactosidase/β-glucosidase

EC:3.2.1.21

1

No

No

Aaci_2328

Endo-1,4-β-xylanase

EC:3.2.1.8

10

No

No

Aaci_2457

Polygalacturonase

EC:3.2.1.15

28

Yes (33/34)

Yes

Aaci_2475

Endoglucanase C

EC:3.2.1.4

9

No

No

Aaci_2630

β-Glucosidase/β-xylosidase

EC:3.2.1.21

EC:3.2.1.37

3

No

No

Aaci_2868

α-Glucosidase

EC:3.2.1.20

31

No

No

Aaci_2869

Neopullulanase/cyclomaltodextrinase/maltogenic α-amylase

EC:3.2.1.135

EC:3.2.1.54

EC:3.2.1.133

13

No

No

Aaci_2874

α-Amylase

EC:3.2.1.1

13

Yes (23/24)

No

Aaci_2887

α-Xylosidase

EC:3.2.1.177

31

No

No

Aaci_2891

β-Galactosidase

EC:3.2.1.23

42

No

No

Aaci_2894

α-l-arabinofuranosidase

EC:3.2.1.55

51

No

No

  1. Classification of Enzyme Commission and glycoside hydrolase family numbers were obtained from the Carbohydrate-Active enZYme database (CAZY). Signal sequences and transmembrane helices were taken from JGI-IMG, and signal sequences were verified using the SignalP program