Glycoside hydrolase gene transcription by Alicyclobacillus acidocaldarius during growth on wheat arabinoxylan and monosaccharides: a proposed xylan hydrolysis mechanism

Table 3 Identification of genome loci in A. acidocaldarius strain DSM 446 genome that encodes putative carbohydrate deacetylase enzymes

Gene locus	Product name	Enzyme Commission number	Family	Signal sequence	Transmembrane helices
Aaci_0255	Polysaccharide deacetylase	EC:3.1.1.72 3.5.1.-	4	No	No
Aaci_0863	N-acetylglucosamine-6-phosphate deacetylase	EC:3.5.1.25 3.5.1.80	9	No	No
Aaci_0881	LmbE family protein	EC:3.5.1.-	14	No	No
Aaci_0954	LmbE family protein	EC:3.5.1.-	14	No	No
Aaci_1372	Polysaccharide deacetylase	EC:3.1.1.72 3.5.1.-	4	Yes (28/29)	No
Aaci_1443	Polysaccharide deacetylase	EC:3.1.1.72 3.5.1.-	4	No	No
Aaci_1912	Polysaccharide deacetylase	EC:3.1.1.72 3.5.1.-	4	No	No
Aaci_2070	LmbE family protein	EC:3.5.1.-	14	No	No

Classification of Enzyme Commission and carbohydrate deacetylase family numbers were obtained from the Carbohydrate-Active enZYme database (CAZY). Signal sequences and transmembrane helices were taken from JGI-IMG, and signal sequences were verified using the SignalP program

ISSN: 2731-3654