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TableĀ 3 Identification of genome loci in A. acidocaldarius strain DSM 446 genome that encodes putative carbohydrate deacetylase enzymes

From: Glycoside hydrolase gene transcription by Alicyclobacillus acidocaldarius during growth on wheat arabinoxylan and monosaccharides: a proposed xylan hydrolysis mechanism

Gene locus Product name Enzyme Commission number Family Signal sequence Transmembrane helices
Aaci_0255 Polysaccharide deacetylase EC:3.1.1.72 3.5.1.- 4 No No
Aaci_0863 N-acetylglucosamine-6-phosphate deacetylase EC:3.5.1.25 3.5.1.80 9 No No
Aaci_0881 LmbE family protein EC:3.5.1.- 14 No No
Aaci_0954 LmbE family protein EC:3.5.1.- 14 No No
Aaci_1372 Polysaccharide deacetylase EC:3.1.1.72 3.5.1.- 4 Yes (28/29) No
Aaci_1443 Polysaccharide deacetylase EC:3.1.1.72 3.5.1.- 4 No No
Aaci_1912 Polysaccharide deacetylase EC:3.1.1.72 3.5.1.- 4 No No
Aaci_2070 LmbE family protein EC:3.5.1.- 14 No No
  1. Classification of Enzyme Commission and carbohydrate deacetylase family numbers were obtained from the Carbohydrate-Active enZYme database (CAZY). Signal sequences and transmembrane helices were taken from JGI-IMG, and signal sequences were verified using the SignalP program