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Table 3 Differentially expressed antioxidant and stress response proteins on kraft lignin

From: Genomic and proteomic analysis of lignin degrading and polyhydroxyalkanoate accumulating β-proteobacterium Pandoraea sp. ISTKB

Uniprot IDs Locus tag Name Log2 fold change Unique peptides Sequence coverage (%) Mol. weight (kDa) Intensity
   Glutathione enzymes      
A0A1E3LF33 A9762_23395 Glutathione ABC transporter substrate-binding protein 1.80871 29 77.1 57.261 0
A0A1E3LKY8 A9762_17040 Glutathione S-transferase 1.18746 8 41.1 24.027 3.57E−36
A0A1E3LF68 A9762_25435 Glutathione S-transferase 0.61286 8 65.2 22.821 1.27E−72
A0A1E3LBR6 A9762_09395 Glutathione S-transferase 0.55477 4 25.7 24.666 5.23E−14
A0A1E3LQD9 A9762_10375 Glutathione S-transferase 0.51263 5 37.8 27.794 1.84E−17
A0A1E3LFJ0 A9762_24585 Glutathione-disulfide reductase 0.35879 22 63.6 48.837 7.37E−222
A0A1E3LI91 A9762_18915 Glutathione S-transferase 0.05437 5 39 25.252 2.31E − 26
A0A1E3LP56 A9762_00695 Glutathione S-transferase − 0.96784 8 53.6 23.768 4.31E−48
A0A1E3LI39 A9762_18265 Glutathione S-transferase − 1.44982 18 82.3 23.728 3.01E−285
A0A1E3LAC5 A9762_09365 Glutathione S-transferase − 1.70035 15 72.6 26.078 1.22E−149
A0A1E3LPY3 A9762_02245 Glutathione synthetase − 1.79520 21 82.4 34.566 2.19E−195
A0A1E3LL68 A9762_15125 Glutathione S-transferase − 1.85572 4 21 23.996 5.81E−18
A0A1E3LI75 A9762_04000 Lactoylglutathione lyase − 1.97244 4 64.5 14.032 1.22E−30
A0A1E3LBC2 A9762_08325 Hydroxyacylglutathione hydrolase − 1.98082 10 57.5 29.087 5.85E−75
A0A1E3LC63 A9762_26475 Glutathione peroxidase 1.59171 9 82.6 18.506 1.18E−57
A0A1E3LN82 A9762_11030 Glutathione peroxidase − 1.47148 10 55.2 19.852 3.04E−128
A0A1E3LL32 A9762_17770 S-(Hydroxymethyl)glutathione dehydrogenase − 1.97881 22 83.7 39.609 5.20E−235
A0A1E3LCG8 A9762_26430 S-Formylglutathione hydrolase − 1.5565 9 49.6 31.49 2.83E−45
   Catalases      
A0A1E3LJG2 A9762_17205 Catalase − 1.90503 31 69.7 55.065 0
A0A1E3LHV5 A9762_19890 Catalase 1.96803 20 58.3 54.314 2.70E−159
A0A1E3LL41 A9762_15065 Catalase 1.96803 20 58.3 54.314 2.70E−159
   Superoxide dismutase      
A0A1E3LHJ2 A9762_20590 Superoxide dismutase − 1.97424 2 12.2 22.201 8.04E−07
A0A1E3LJK7 A9762_16420 Superoxide dismutase − 1.6319 16 93.2 21.3 0
   Thioredoxin      
A0A1E3LA95 A9762_09775 Thioredoxin 1.50102 6 68.5 11.693 1.86E−50
A0A1E3LIM9 A9762_21500 Thioredoxin 0.26594 13 64 30.297 2.12E−120
A0A1E3LMC9 A9762_12720 Probable thiol peroxidase − 1.29118 15 95.8 17.552 1.19E−229
A0A1E3LK52 A9762_19935 Thioredoxin reductase − 0.42918 12 71.1 33.796 6.61E−169
   Peroxiredoxin      
A0A1E3LFM2 A9762_22670 Peroxiredoxin 0.06241 4 27.7 19.976 2.59E−09
A0A1E3LG33 A9762_25080 Peroxiredoxin − 0.7565 5 51.9 17.411 3.34E−34
A0A1E3LIX5 A9762_17525 Peroxiredoxin 1.63617 11 84.5 20.829 4.52E−87
A0A1E3LNW8 A9762_00130 Peroxiredoxin − 1.41372 5 35 14.926 1.51E−22
   Glyoxylase      
A0A1E3LJS5 A9762_02855 Glyoxalase 1.90407 4 26.4 24.933 1.26E−10
A0A1E3LML8 A9762_12845 Glyoxalase − 1.55877 4 40.7 15.609 4.05E−12
   Glutaredoxin      
A0A1E3LF15 A9762_23485 Glutaredoxin − 0.65795 4 51.9 11.612 1.33E−69
A0A1E3LQ32 A9762_02205 Glutaredoxin 3 1.02376 8 79.1 9.8904 4.95E−60
   Alkylperoxide reductase      
A0A1E3LAL5 A9762_08705 Alkyl hydroperoxide reductase − 1.92917 10 79.1 16.924 2.59E−121
A0A1E3LDK0 A9762_25350 Alkyl hydroperoxide reductase AhpD 1.76395 5 40.7 22.242 5.04E−30
A0A1E3LCA5 A9762_26215 Alkyl hydroperoxide reductase AhpD − 1.58398 5 49.5 19.7 1.06E−56
A0A1E3LGT9 A9762_04630 Alkyl hydroperoxide reductase AhpD − 0.87073 6 67.7 14.207 2.45E−17
A0A1E3LKG5 A9762_16100 Alkyl hydroperoxide reductase AhpD − 1.52586 9 64.9 21.888 2.68E−61
A0A1E3LLQ8 A9762_13730 Alkyl hydroperoxide reductase AhpD − 0.29909 10 77.7 18.588 4.23E−101
A0A1E3LLX0 A9762_13735 Alkyl hydroperoxide reductase − 0.30453 16 85.7 20.001 0