Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass

Table 3 Genes coding for auxiliary activity enzymes highly transcribed and secreted during SSF on wheat straw

Prot ID	Node ID	Detected in the secretome	Log2 normalized read counts				Predicted function
Prot ID	Node ID	Detected in the secretome	Control	Day 4	Day 10	Day 15	Predicted function
1399288	209	D10, D15	11.43	13.63	13.92	13.34	AA3_2 GMC oxidoreductase
855582	267	D10, D15	6.47	9.20	8.51	8.46	AA2 MnP-short
1353775	331	D15	6.91	9.39	11.21	8.98	AA5_1 copper radical oxidase
1343556	349	D4, D10, D15	12.06	12.84	13.27	13.28	AA3_2 GMC oxidoreductase
1486819	372	D4, D10, D15	8.52	16.89	14.66	12.89	AA2 MnP-short
1359988	400	D4, D10, D15	6.73	17.36	10.29	7.41	AA2 VP
1422328	416	D10, D15	15.27	15.94	16.52	14.83	AA3_2 GMC oxidoreductase
1364967	417	D10, D15	10.76	17.12	16.14	15.71	AA3_3 GMC oxidoreductase
1487275	417	D4, D10, D15	9.84	18.95	17.82	15.66	AA2 VP
713930	418	D10, D15	8.38	17.61	18.31	17.41	AA5_1 copper radical oxidase
897918	418	D4, D10, D15	8.06	15.10	16.76	16.49	AA2 VP
1412926	418	D4, D10, D15	7.42	14.95	17.04	16.86	AA2 VP
1557562	418	D4, D10, D15	6.06	16.87	17.30	16.83	AA5_1 copper radical oxidase
918032	419	D4	7.31	17.99	14.98	10.42	AA2 VP
1360396	419	D4, D10, D15	6.40	18.95	14.78	12.07	AA2 VP
1185543	420	D4, D10, D15	7.00	12.95	15.69	16.08	AA2 MnP-short
1347226	420	D4, D10, D15	6.63	12.72	15.16	16.27	AA2 MnP-short
1487292	422	D10, D15	5.49	15.94	12.94	8.21	AA2 MnP-short

Control/Day 4/Day 10/Day 15: average log2 read count of combined biological replicates per condition. Log2 normalized read counts > 12, considered here as high transcription levels, are indicated with italics

ISSN: 2731-3654