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Table 1 List of interacted DEGs for M2 vs SPT15. SPT15 stands for the strain overexpressing wild-type SPT15

From: Engineering TATA-binding protein Spt15 to improve ethanol tolerance and production in Kluyveromyces marxianus

Category

Gene list

Ribosome biogenesis and rRNA processing

BMS1, CBF5, CGR1, CIC1, DBP3, DBP7, DHR2, DRS1, EBP2, ECM16, EFG1, ENP1, FAL1, FCF2, GAR1, IMP4, IPI3, KRI1, MAK11, MAK16, MDN1, MTR4, NAN1, NIP7, NOC4, NOP12, NOP16, NOP53, NOP58, NOP7, NOP8, NOP9, NSA1, NUG1, PNO1, PWP1, PXR1, RCL1, RIO2, RLP7, ROK1, RRB1, RRP14, RRP3, RRP4, RRP42, RRP43, RRP45, RRP46, RRP8, RRS1, SAS10, SGD1, SKI6, SLX9, SPB4, SQT1, SSF1, UTP10, UTP18, UTP25, UTP30, UTP4, UTP9, YVH1, etc.

ncRNA transcription

PZF1, RPC11, RPC25, RPC37, RPC53, RPO31, TFC1, etc.

mRNA metabolic process

CUS1, NAM8, NPL3, PRP42, RPB7, SPT4, etc.

Golgi vesicle transport

EMP47, ERP1, ERV25, ERV29, SEC13, SEC18, SEC22, TLG2, TRS33, UFE1, etc.

Posttranslational protein targeting to membrane

GET3, GET4, SBH1, SEC61, SEC62, SEC72, SGT2, etc.

Ubiquitin-dependent protein catabolic process

DOA1, PRE2, PRE3, PRE7, PUP1, PUP3, RPN5, RPT3, RPT4, UBP6, etc.

Dicarboxylic acid metabolism

AAT1, FOL1, GDH3, KGD1, MIS1, etc.

Mitochondrial membrane organization

TAZ1, TOM20, TOM70, etc.