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Table 3 CDS variations in SyBE_Sc2110M1 and SyBE_Sc2110M3 with respect to SyBE_Sc307001

From: Astaxanthin overproduction in yeast by strain engineering and new gene target uncovering

Chromosome Gene Position and mutate Function
Specific to SyBE_Sc2110M1
 ChrIV HKR1 1308011: V<->Aa Zinc finger family member
1308047: V<->Aa
URC2 1482052: Y<->Ca Putative transcription factor
 ChrVII PDR1 470224: C<->Fa Transcription factor
GTO1 797427: K<->Qa Glutathione transferase
 ChrXII UBR2 188380: Q<->Ha Cytoplasmic ubiquitin-protein ligase
 ChrXIII YMR317W 908196: W<->Sa Hypothetical protein
908198: A<->Sa
YML084W 99616D: ATb Hypothetical protein
 ChrXV NDD1 1036169D: TTGc Transcriptional activator
YOL166C 1109D: TAb Hypothetical protein
 ChrXVI RRG8 765953: N<->Ka Hypothetical protein
Specific to SyBE_Sc2110M3
 ChrII YBR012W-B 263145D: Cb Retrotransposon TYA Gag
 ChrXII YLR410W-B 944238: Q<->Ka Retrotransposon TYA Gag and TYB Pol
Commonalities
 ChrI FLO9 27080: V<->Ia Mannose-binding lectin
25872: I<->Ma
26144: M<->La
 ChrII YBL100W-A 30754: D<->Na Retrotransposon TYA Gag
 ChrIII TAF2 204436I: CTTCCTCTTCCb RNA polymerase II transcription initiation
 ChrIV YDR340W 1150913I: Gb Hypothetical ORF
 ChrVIII YHL050C 1748: N<->Sa Hypothetical ORF
YHL041W 17546I: Tb Hypothetical ORF
 ChrIX CSS1 25586: D<->Ga Hypothetical ORF
   25418: D<->Ga
 ChrX DAN4 715095: P<->Sa Cell wall mannoprotein
715122: P<->Sa
YJR023C 470178: D: ATAc Protein required for cell viability
 ChrXI YKL225W 458I: Ab Hypothetical ORF
 ChrXV YOR192C-B 708819: A<->Ga Retrotransposon TYA Gag
 ChrXIV YNL338W 6637D: ACb Hypothetical ORF
 ChrXVI DPB2 896899: F<->Ya DNA polymerase epsilon
  1. aMissense substitutions, numbers indicated the mutagenesis sites in chromosome, capital letters indicated the corresponding mutations on amino acids
  2. bFrame-shift mutations, numbers indicate the mutagenesis sites in chromosome, “D” is for deletion, “I” is for insertion, capital letters after “:” indicates the deleted or inserted base(s)
  3. cIn frame insertions/deletions, numbers indicate the mutagenesis sites in chromosome, “D” is for deletion, capital letters after “:” indicates the deleted or inserted base(s)