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Table 3 Subset of genes with significant differential transcript levels in D5A during nitrogen-deprived condition (5 mM, − N) compared to nitrogen-repleted condition (35 mM, + N) in time points of T1, T2, and T3, as well as D5A compared to BY4741

From: Oleaginicity of the yeast strain Saccharomyces cerevisiae D5A

Name D5A (− N/+ N) (Log2) D5A/BY4741 (Log2) Function
FA/TAG synthesis
OLE1 1.2 4.5 Delta(9) fatty acid desaturase
ELO3 1.5 0.2 Elongase
PIS1 1.1 − 0.3 Phosphatidylinositol synthase
POX1 − 1.4 2.4 Fatty-acyl coenzyme A oxidase
FAA1 − 1.4 0.8 Long-chain fatty-acyl-CoA synthetase
N metabolism
GLT1 1.6 1.0 NAD(+)-dependent glutamate synthase (GOGAT)
GLN1 1.9 0.00 Glutamine synthetase (GS)
GDH1 1.4 − 0.3 NADP(+)-dependent glutamate dehydrogenase
GDH2 0.6 0.5 NAD(+)-dependent glutamate dehydrogenase
AA metabolism
ARO8 3.4 − 1.5 Aromatic aminotransferase I
LEU2 2.4 6.9 Beta-isopropylmalate dehydrogenase (IMDH)
CHA1 2.7 − 3.6 Catabolic l-serine (l-threonine) deaminase
BAT1 3.3 − 2.5 Mitochondrial branched-chain amino acid (BCAA) aminotransferase
ASN1 2.4 − 3.1 Asparagine synthetase
EMP
HXK2 2.9 − 0.3 Hexokinase isoenzyme 2
TDH1 − 3.8 1.4 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
HXK1 − 3.2 1.4 Hexokinase isoenzyme 1
GLK1 − 3.0 1.9 Glucokinase
GPM1 − 2.1 − 0.3 Tetrameric phosphoglycerate mutase
FBP1 − 2.1 1.6 Fructose-1,6-bisphosphatase
PYK2 − 2.1 − 0.6 Pyruvate kinase
PGK1 − 1.9 − 0.1 3-Phosphoglycerate kinase
PPP
TKL1 2.4 − 0.1 Transketolase
SOL3 1.4 − 326 6-Phosphogluconolactonase
GND1 1.1 0.3 6-Phosphogluconate dehydrogenase (decarboxylating)
TKL2 − 3.3 3.0 Transketolase
TAL1 − 2.1 0.3 Transaldolase
ZWF1 − 1.7 − 1.0 Glucose-6-phosphate dehydrogenase (G6PD)
TCA cycle
PYC1 − 2.0 0.3 Pyruvate carboxylase isoform
CIT1 − 3.3 1.1 Citrate synthase
CIT3 − 2.6 − 0.3 Dual specificity mitochondrial citrate and methylcitrate synthase
ACO1 − 1.2 2.5 Aconitase
SDH1 − 1.5 1.8 Flavoprotein subunit of succinate dehydrogenase
MDH1 − 2.3 0.8 Mitochondrial malate dehydrogenase
SDH2 − 1.6 1.9 Iron–sulfur protein subunit of succinate dehydrogenase
FUM1 − 1.0 1.3 Fumarase
KGD1 − 1.5 1.0 mitochondrial α-ketoglutarate dehydrogenase complex subunit
KGD2 − 1.1 1.7 Dihydrolipoyl transsuccinylase
ICL1 − 1.4 1.4 Isocitrate lyase
Other
YAT1 − 4.1 0.5 Outer mitochondrial carnitine acetyltransferase
CIT2 − 4.9 − 0.4 Citrate synthase
ICL1 − 1.4 1.4 Isocitrate lyase
ACS1 − 3.5 2.1 Acetyl-coA synthetase isoform
PDC6 1.5 0.7 Minor isoform of pyruvate decarboxylase
ADH4 − 3.3 4.0 Alcohol dehydrogenase isoenzyme type IV
ALD6 − 1.2 1.3 Cytosolic aldehyde dehydrogenase
GPP1 1.2 − 0.5 Constitutively expressed dl-Glycerol-3-phosphate phosphatase
GPP2 1.5 − 0.7 dl-Glycerol-3-phosphate phosphatase involved in glycerol biosynthesis
  1. All transcriptional differences are shown as the mean of duplicate log2-based values