Table 3 Total genes affected by growth rate and substrate

From: A global analysis of gene expression in Fibrobacter succinogenes S85 grown on cellulose and soluble sugars at different growth rates

Pair-wise comparison		Total genes
Growth rate		639
Faster rate	Slower rate	639
267	372	639
Substrate		483
Cellulose (adherent)	Glucose	226
112	114	226
Cellulose (adherent)	Cellobiose	164
78	86	164
Cellulose (adherent)	Cellulose (planktonic)	184
0	184	184
Cellulose (planktonic)	Glucose	276
227	49	276
Cellulose (planktonic)	Cellobiose	228
205	23	228
Cellobiose	Glucose	110
44	66	110

Pair-wise comparison results are the number of genes up-regulated under a given condition for each specific comparison (FDR < 0.01 & LFC > 1.5)

Back to article page