Skip to main content

Table 1 Binding affinities of a given family 4, 17, or 28 CBM for cellopentaose

From: Cellulose-specific Type B carbohydrate binding modules: understanding oligomeric and non-crystalline substrate recognition mechanisms

References

CBM

Method

Temperature (K)

pH

Buffer conditions

∆G° (kcal/mol)

Tomme et al. [23]

CfCBM4-1

ITC

308

7.0

Pure water

− 5.23 ± 0.91

Tomme et al. [23]

CfCBM4-1

ITC

308

7.0

50 mM potassium phosphate

− 6.09 ± 0.64

Tomme et al. [23]

CfCBM4-1

ITC

308

7.0

50 mM potassium phosphate

1.0 M NaCl

− 6.21 ± 0.57

Brun et al. [58]

CfCBM4-2

ITC

308

7.0

50 mM potassium phosphate

1.0 M NaCl

− 5.80 ± 0.005

Boraston et al. [22]

CcCBM17

Fluorescence

298

7.5

25 mM Tris–HCl

− 6.72

Boraston et al. [22]

CcCBM17

Fluorescence

298

7.5

25 mM Tris–HCl

0.5 M NaCl

− 6.93

Boraston et al. [22]

CcCBM17

Fluorescence

298

7.5

25 mM Tris–HCl

1.0 M NaCl

− 7.05

Boraston et al. [22]

CcCBM17

Fluorescence

298

7.5

25 mM Tris–HCl

2.0 M NaCl

− 7.24

Notenboom et al. [24]

CcCBM17

ITC

298

7.0

50 mM potassium phosphate

− 5.80 ± 0.03

Boraston et al. [21]

Bsp CBM28

UV

298

7.0

25 mM Tris–HCl

− 5.81 ± 0.14

Boraston et al. [21]

Bsp CBM28

ITC

298

7.0

50 mM potassium phosphate

− 5.93 ± 0.003

Araki et al. [29]

CjCBM17

ITC

293

7.0

100 mM potassium phosphate

− 7.7 ± 0.3

Araki et al. [29]

CjCBM28

ITC

293

7.0

100 mM potassium phosphate

− 7.7 ± 0.6

  1. The CBMs listed here include: Cellulomonas fimi CBM4-1 and CBM4-2 (CfCBM4-1 and CfCBM4-2), Clostridium cellulovorans CBM17 (CcCBM17), Bacillus sp. 1139 CBM28 (BspCBM28), and Clostridium josui CBM28 (CjCBM28). The methods for obtaining binding affinities in the referenced study are listed as either isothermal titration calorimetry (ITC), fluorescence emission scans, or ultraviolet (UV) difference spectra. Reported experimental conditions are as given