Designation | Relevant characteristics | Source or reference |
---|---|---|
Strains | ||
 B. coagulans NL01 | Undomesticated wild strain | Laboratory preservation |
 B. coagulans ATCC 7050 | Undomesticated wild strain | American Type Culture Collection |
 B. coagulans XZL4 | Undomesticated wild strain | Professor Ping Xua |
 B. coagulans ATCC 7050 (ΔcelR) | celR deletion strain of B. coagulans ATCC 7050 | This study |
 L. lactis MG1363 | Host for gene cloning | Laboratory preservation |
 E. coli BL21(DE3) | Host for protein expression | Invitrogen |
 E. coli BL21 (pET-celo1) | E. coli BL21(DE3) harboring the plasmid pET-celo1 | This study |
 E. coli BL21 (pET-celo2) | E. coli BL21(DE3) harboring the plasmid pET-celo2 | This study |
 E. coli BL21 (pETDuet-1) | E. coli BL21(DE3) harboring the plasmid pETDuet-1 | This study |
Plasmids | ||
 pMH77 | pSH71 replication containing temperature-sensitive vector, Cmr | Professor Oscar P. Kuipersb |
 pMD-19T | Gene cloning vector, Ampr | TaKaRa |
 19T-celR1 | pMD-19T containing the flanking regions of celR | This study |
 pMH77-celR1 | pMH77 containing the flanking regions of celR | This study |
 pETDuet-1 | Protein expression vector, Ampr | Novagen |
 pET-celo1 | pETDuet-1 containing the CELO1 from B. coagulans NL01 | This study |
 pET-celo2 | pETDuet-1 containing the CELO2 from B. coagulans NL01 | This study |
Primers | Sequences (5′ → 3′) and properties |  |
 celR1up.f | GATCCGGAATTCCCACACAAAGGGAAATTACGTAAGCCAC (EcoRI) | This study |
 celR1up.r | GTAAATGGCGGCGGCACTGAGCTCATGCCAACAACTCCCTTTTATCATTG | This study |
 celR1down.f | CAATGATAAAAGGGAGTTGTTGGCATGAGCTCAGTGCCGCCGCCATTTAC | This study |
 celR1down.r | CATCCGCTCGAGCAATATCATCCAGTTTCACCATATTCGG (XhoI) | This study |
 celo1.f | AGATCTCTTGAACATAGAAGAAATCAGTTTTC (BglII) | This study |
 celo1.r | GGTACCTTATTTTATACATGCCATTAACTCAT (KpnI) | This study |
 celo2.f | GAGCTCGTTGATTTCGAATCGGCAAAAAC (SacI) | This study |
 celo2.r | CTCGAGTTAAGCAATGCTATCCTTCGTCGT (XhoI) | This study |