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Fig. 9 | Biotechnology for Biofuels

Fig. 9

From: Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass

Fig. 9

PBD CAZyme gene expression and TFs hierarchical clustering in the deletion mutants Δxyr1, Δara1 and Δxki1 compared to the reference strain in corn stover and soybean hulls. a, c Fold change analysis. Differentially expressed genes were those with a p value ≤ 0.05, fold change > 2.5 (log2foldchange > 1.32) compared to pre-culture and FPKM ≥ 18 in at least one condition. b, d Total expression analysis were performed with average FPKM level between 3 replicates in plant biomass and 2 replicates in pre-culture. Error bars represent the standard error on the total PBD CAZyme expression. E = TFs hierarchical clustering

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