Table 1 Support for xyr1-activation of the PBD CAZymes that were higher expressed in the Δxki1 mutant at later time-points in corn stover (CS_24 h) and soybean hulls (SBH_48 h)
Trire2_geneID | Gene name | Activity | Regulated by | CS_24Â h | SBH_48Â h |
|---|---|---|---|---|---|
3739 | Â | BXL/ABF | XYR1 | Yes | Yes |
22197 | cel1b/bgl1b | BGL | XYR1 | Yes | Yes |
46816 | cel3d/bgl3d | BGL | Unknown | Yes | No |
49081 | cel74a | XEG | ARA1/XYR1 | Yes | Yes |
49976 | egl5/cel45a | EGL | XYR1 | Yes | Yes |
56996 | man1 | MAN | XYR1 | No | Yes |
60489 | Â | CUT | Unknown | No | Yes |
62166 | Â | MND | Unknown | No | Yes |
69944 | Â | AXL/AGD | ARA1 (XYR1) | No | Yes |
72526 | glr1/agu1 | AGU | XYR1 | No | Yes |
72567 | cbh2/cel6a | CBH | XYR1 | Â | Yes |
73632 | axe1 | AXE | XYR1 | No | Yes |
73643 | egl4/cel61a | LPMO | XYR1 | Yes | Yes |
76210 | abf2 | ABF | ARA1(XYR1) | Yes | No |
76227 | cel3e/bgl3e | BGL | Unknown | No | Yes |
76672 | bgl1/cel3a/bgl3a | BGL | XYR1 | No | Yes |
82227 | cel3c/bgl3c | BGL | XYR1 | No | Yes |
82235 | Â | AGD | XYR1 | No | Yes |
103049 | Â | PGA | ARA1(XYR1) | Yes | No |
108477 | Â | AGD | Unknown | No | Yes |
111849 | xyn4 | XLN | XYR1 | No | Yes |
112140 | pgx1 | PGX | Unknown | No | Yes |
120229 | xyn3/xyn10a | XLN | XYR1 | No | Yes |
120312 | egl2/cel5a | EGL | XYR1 | No | Yes |
120961 | cel61b | LPMO | XYR1 | No | Yes |
121127 | bxl1/xyl3a | BXL | XYR1 | No | Yes |
121418 | aes1 | AES | XYR1 | No | Yes |
121735 | cel3b/bgl3b | BGL | XYR1 | No | Yes |
122081 | egl1/cel7b | EGL | XYR1 | No | Yes |
122780 | rgx1 | RGX | ARA1 | No | Yes |
123232 | egl3/cel12a | EGL | XYR1 | No | Yes |
123283 | abf1 | ABF | ARA1(XYR1) | No | Yes |
123818 | xyn2/xyn11a | XLN | XYR1 | No | Yes |
123940 | cip2 | GE | XYR1 | No | Yes |
123989 | cbh1/cel7a | CBH | XYR1 | Yes | Yes |
124016 | agl2 | AGL | ARA1 | No | Yes |