Table 2 Genes with nonsynonymous variants in two major and two minor QTLs
QTLs | Chr | Start (bp) | End (bp) | Length (bp) | LOD score | Affected gene | Mutation (S288c genome as a reference) | |
|---|---|---|---|---|---|---|---|---|
ScY01α-tp | W65a-sp | |||||||
Major QTLs | ||||||||
 QTL1 | II | 408,800 | 553,700 | 144,900 | 17 | RXT2 | 331 C>G (R111G) | Wild type |
VID24 | 154 C>T (P52S) | Wild type | ||||||
 QTL2 | XII | 595,800 | 633,500 | 37,700 | 300 | ECM22 | 1954 G>A (G652S) | Wild type |
VPS34 | 1773 C>G (D591E) | Wild type | ||||||
CSC1 | 1126 C>A (Q376K) | Wild type | ||||||
Minor QTLs | ||||||||
 QTL3 | XV | 174,500 | 184,900 | 10,400 | 272 | IRA2 | Wild type | 7222 C>A (P2408T) |
AVO1 | Wild type | 2558 T>C (V853A) | ||||||
 QTL4 | XVI | 228,200 | 238,100 | 9900 | 155 | DAP1 | Wild type | 115 G>A (V39I) |