Species of CAZomes | CUPP F-score | dbCAN2 tools F-score | Relevant Proteins in CAZome | ||||
---|---|---|---|---|---|---|---|
CUPP fast-filtering | CUPP full-filtering | Predicted by ≥ 2 tools | dbCAN-HMM | dbCAN-Hotpep | dbCAN-Diamond | ||
Arabidopsis thaliana | 99.39 | 98.76 | 99.23 | 97.70 | 97.71 | 96.52 | 980 |
Aspergillus nidulans FGSC A4 | 96.98 | 96.40 | 97.95 | 95.63 | 92.60 | 95.44 | 424 |
Saccharomyces cerevisiae S288c | 98.58 | 98.58 | 99.80 | 98.58 | 99.80 | 97.33 | 91 |
Average of Eukaryote CAZomes | 98.32 | 97.91 | 98.99 | 97.30 | 96.70 | 96.43 | Â |
Caldicellulosiruptor bescii DSM 6725 | 98.61 | 94.80 | 96.59 | 96.59 | 89.68 | 89.02 | 94 |
Escherichia coli K-12 MG1655 | 98.38 | 97.27 | 97.27 | 95.56 | 97.02 | 94.38 | 119 |
Hungateiclostridium thermocellum ATCC 27405 | 97.19 | 94.73 | 96.75 | 98.72 | 87.11 | 74.74 | 125 |
Average of bacterial CAZomes | 98.06 | 95.60 | 96.87 | 96.96 | 91.27 | 86.05 | Â |
Average of CAZomes | 98.19 | 96.76 | 97.93 | 97.13 | 93.99 | 91.24 | Â |
Complete runtime for the CAZomes [s] | 34.33 | 54.23 | 255.23 | 128.61 | 91.25 | 35.37 | Â |