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Fig. 4 | Biotechnology for Biofuels

Fig. 4

From: Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes

Fig. 4

Protein abundance of cellulosomal components, detected in different size fractions (I or II) from supernatant fluids derived from cells grown on soluble and insoluble cellulosic carbon sources (CB or MCC). Heatmap of protein expression values of a 24 B. cellulosolvens scaffoldins (Additional file 4: Table S3A); b 30 (of 166) selected most abundant dockerin-containing proteins (Additional file 4: Table S3B). Names of genes (locus tags) and their CAZy modules are noted. Heatmaps were generated using LFQ intensities (log2), where zero intensity values were imputed to 10. Rows were standardized and clustered by partitional clustering using the Euclidian method. Full list of gene names and intensities is detailed in Additional file 1: Table S1. Numbers from 1 to 3 at top represent different triplicates from the two growth substrates. CB: cellobiose; MCC: microcrystalline cellulose; Doc: dockerin; GH: glycoside hydrolase; CBM: carbohydrate-binding module; CE: carbohydrate esterase; PL: polysaccharide lyases

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