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Table 2 Selected marker genes in A. resinae ZN1

From: Heterozygous diploid structure of Amorphotheca resinae ZN1 contributes efficient biodetoxification on solid pretreated corn stover

Haploid A. resinae ATCC 22711

Diploid A. resinae ZN1

Homology similarity

Scaffold

Gene ID

Scaffold

Gene ID

ORF (%)

Proteins (%)

1

estExt_Genewise1Plus.C_1_t40069

92

ARZ_14322_T1

99.86

99.92

93

ARZ_14430_T1

96.18

96.12

2

e_gw1.2.2111.1

6

ARZ_2135_T1

100.00

100.00

28

ARZ_6929_T1

94.14

94.79

3

CE64328_29605

46

ARZ_9744_T1

100.00

100.00

86

ARZ_13904_T1

94.73

96.09

4

estExt_fgenesh1_pg.C_4_T10012

64

ARZ_11870_T1

100.00

100.00

61

ARZ_11534_T1

97.51

97.93

5

estExt_fgenesh1_pm.C_5_T10315

27

ARZ_6758_T1

89.07

90.61

1

ARZ_138_T1

90.15

86.99

6

estExt_Genewise1Plus.C_6_T10318

151

ARZ_17156_T1

98.05

100.00

100

ARZ_14875_T1

96.97

97.39

7

e_gw1.7.284.1

60

ARZ_11497_T1

99.90

100.00

31

ARZ_7445_T1

98.46

98.27

8

fgenesh1_pm.8_#_399

2

ARZ_581_T1

99.94

100.00

105

ARZ_15233_T1

97.42

99.24

9

CE116897_14148

55

ARZ_10881_T1

100.00

100.00

7

ARZ_2411_T1

97.35

98.40

10

estExt_Genewise1.C_10_T10202

50

ARZ_10290_T1

100.00

100.00

8

ARZ_2545_T1

95.76

95.97

11

e_gw1.11.426.1

48

ARZ_9991_T1

99.25

99.00

108

ARZ_15400_T1

90.89

90.00

12

e_gw1.12.147.1

53

ARZ_10682_T1

99.33

99.32

30

ARZ_7271_T1

96.97

96.96

13

gm1.8671_g

5

ARZ_1809_T1

99.19

99.71

12

ARZ_3780_T1

97.46

97.79

14

gm1.8732_g

84

ARZ_13700_T1

98.39

99.35

118

ARZ_15925_T1

96.90

98.64

15

e_gw1.15.374.1

69

ARZ_12452_T1

99.53

99.39

37

ARZ_8414_T1

97.77

98.17

  1. It selected 15 gene pairs (30 genes) in A. resinae ZN1 corresponding to the total 15 scaffolds of A. resinae ATCC 22711 with protein-coding genes as marker genes. The one with the higher homology similarity to the corresponding single gene in A. resinae ATCC 22711 was defined as the gene pair-I labelled with italic, and the other one was defined as the gene pair-II labelled with bold italic