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Table 2 Gene ontology term enrichment during transition to lipid accumulation

From: Transcriptomic analysis of the oleaginous yeast Lipomyces starkeyi during lipid accumulation on enzymatically treated corn stover hydrolysate

GO term Fold enrichment Corrected p value
Up-regulated gene clusters
Integral to membrane 1.98 7.81E−27
Transporter activity 2.40 3.14E−23
Oxidoreductase activity 1.88 1.13E−12
l-arabinose isomerase activity 2.86 7.23E−12
Carbohydrate transport 2.53 8.91E−09
Sugar:hydrogen symporter activity 2.65 1.30E−08
Carbohydrate metabolic process 2.23 2.81E−07
Nucleobase, nucleoside, nucleotide and nucleic acid transport 3.71 1.25E−04
Transcription factor activity 1.75 7.26E−04
Hydrolase activity, hydrolyzing O-glycosyl compounds 2.45 7.01E−03
Down-regulated gene clusters
Structural constituent of ribosome 4.35 1.57E−57
Translation 3.59 1.13E−56
RNA binding 2.97 1.41E−10
Protein folding 2.99 1.05E−06
Unfolded protein binding 3.55 2.65E−06
rRNA processing 4.11 3.51E−04
Ribosome biogenesis and assembly 4.79 7.78E−04
ATP binding 1.41 2.64E−03
Translational elongation 4.32 5.72E−03
Aminoacyl-tRNA ligase activity 2.51 3.48E−02
  1. Combined analysis of the clusters of genes up- and down-regulated during the transition. p value was corrected for multiple comparisons using the Bonferroni method