Skip to main content

Table 2 Gene ontology term enrichment during transition to lipid accumulation

From: Transcriptomic analysis of the oleaginous yeast Lipomyces starkeyi during lipid accumulation on enzymatically treated corn stover hydrolysate

GO term

Fold enrichment

Corrected p value

Up-regulated gene clusters

Integral to membrane

1.98

7.81E−27

Transporter activity

2.40

3.14E−23

Oxidoreductase activity

1.88

1.13E−12

l-arabinose isomerase activity

2.86

7.23E−12

Carbohydrate transport

2.53

8.91E−09

Sugar:hydrogen symporter activity

2.65

1.30E−08

Carbohydrate metabolic process

2.23

2.81E−07

Nucleobase, nucleoside, nucleotide and nucleic acid transport

3.71

1.25E−04

Transcription factor activity

1.75

7.26E−04

Hydrolase activity, hydrolyzing O-glycosyl compounds

2.45

7.01E−03

Down-regulated gene clusters

Structural constituent of ribosome

4.35

1.57E−57

Translation

3.59

1.13E−56

RNA binding

2.97

1.41E−10

Protein folding

2.99

1.05E−06

Unfolded protein binding

3.55

2.65E−06

rRNA processing

4.11

3.51E−04

Ribosome biogenesis and assembly

4.79

7.78E−04

ATP binding

1.41

2.64E−03

Translational elongation

4.32

5.72E−03

Aminoacyl-tRNA ligase activity

2.51

3.48E−02

  1. Combined analysis of the clusters of genes up- and down-regulated during the transition. p value was corrected for multiple comparisons using the Bonferroni method