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Table 1 Bacterial strains and plasmids used in this study

From: Adaptively evolved Escherichia coli for improved ability of formate utilization as a carbon source in sugar-free conditions

Name

Description

Reference

Strains

 DH5α

 

RBC

 Wild-type

BL21(DE3)

KCTC

 EM

BL21(DE3) harboring pZAM

This study

 EMK

EM harboring pZAM01

This study

 EMK00

EMK ΔgcvP

This study

 EMK01

EMK00 harboring pZAM02

This study

 EMK02

EMK00 harboring pZAM02 and pCDM02

This study

 EMK02A2

ALE mutant from EMK02 for 60th serial subcultures

This study

 EMK02A5

ALE mutant from EMK02 for 150th serial subcultures

This study

 vA5f

EMK02A2 harboring pZSfimCD

This study

 vA5y

EMK02A2 harboring pZSydeH

This study

 vA5h

EMK02A2 harboring pZShtrE

This study

 vA5c

EMK02A2 harboring pZScsgD

This study

 EMK02etOH

EMK02 harboring pZSetOH

This study

 EMK02A2etOH

EMK02A2 harboring pZSetOH

This study

 EMK02A5etOH

EMK02A5 harboring pZSetOH

This study

Plasmids

 pZA31MCS

p15A ori PLtetO-1 CmR

Expressys

 pZS21MCS

pCS101 ori PLtetO-1 KanR

Expressys

 pCDFDuet-1

Double T7 promoter, CloDF13 ori, SmR

Novagen

 pKD4

FRT flanked resistance cassette involved vector, oriRγ, KmR

Datsenko and Wanner [42]

 pRedET

Red recombinase expression plasmid, repA, pSC101ori, PBAD, gam, beta alpha, recA, tetR

Gene Bridge

 707FLP

Flippase expression plasmid, pSC101ori, repA, cl578, FLPe, tetR

Gene Bridge

 pZAM

pZA31MCS containing gene ftfL from M. extorquens AM1

This study

 pZAM01

pZAM containing genes mtdA and fch from M. extorquens AM1

This study

 pZAM02

pZAM01 containing gene glyA from M. extorquens AM1

This study

 pCDM02

pCDFDuet-1 containing genes sga, hpr and gck from M. extorquens AM1

This study

 pZSetOH

pZS21MCS containing genes pdc from Z. mobilis and adhA from L. lactis

This study

 pZSfimCD

pZS21MCS containing genes fimC and fimD from E. coli

This study

 pZSydeH

pZS21MCS containing gene ydeH from E. coli

This study

 pZShtrE

pZS21MCS containing gene htrE from E. coli

This study

 pZScsgD

pZS21MCS containing gene csgD from E. coli

This study