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Fig. 6 | Biotechnology for Biofuels

Fig. 6

From: Identification of candidate genes controlling oil content by combination of genome-wide association and transcriptome analysis in the oilseed crop Brassica napus

Fig. 6

Comparison of gene expression of TAG biosynthesis pathway and TAG assembly in all four tissues among HO and LO B. napus lines. The color boxes are the heatmap of gene expressions from RNA-seq which were normalized by the log2 FPKM (calculation method) (Additional file 1: Table S6). Abbreviation of genes that encode proteins (blue letters): PDHC pyruvate dehydrogenase complex, ACCase acetyl-CoA carboxylase, MCMT malonyl-CoA:ACP malonyltransferase, ACP acyl carrier protein, KASI/II/III 3-ketoacyl-ACP synthase I/II/III, KAR ketoacyl-ACP reductase, HAD hydroxyacyl-ACP dehydrase, ENR enoyl-ACP reductase, SAD stearoyl-acyl carrier protein desaturase, FATA/B fatty acyl-ACP thioesterase A/B, FAX1 plastid fatty acid export 1, LACS9 long-chain acyl-CoA synthetase 9, GPDH glycerol-3-phosphate dehydrogenase, GPAT9 glycerol-3-phosphate acyltransferase 9, LPAAT lysophosphatidic acid acyltransferase, PAP phosphatidic acid phosphatase, DGAT diacylglycerol acyltransferase, LPCAT lysophosphatidylcholine acyltransferase, FAD2/3 fatty acid desaturase 2/3, PLD phospholipase D, PDAT phospholipid:diacylglycerol acyltransferase, PDCT phosphatidylcholine:diacylglycerol cholinephosphotransferase, CPT CDP-choline:diacylglycerol cholinephosphotransferase, PLC phospholipase C, OBO oil body oleosin, CALO caleosin

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