Table 3 All genes within the confidence interval of significant related SNPs with SOC belong to ALM genes
ALM genes in confidence interval | At orthologs | Pathways | Function description |
|---|---|---|---|
BnaC05g10520D | AT1G14290 | Sphingolipid biosynthesis 1 | Sphingoid base hydroxylase 2 (SBH2) |
BnaA01g12830D | AT1G73550 | Fatty acid elongation and wax biosynthesis | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
BnaC07g34330D | AT3G10550 | Phospholipid signaling | Myotubularin-like phosphatases II superfamily |
BnaA03g36710D | AT3G22620 | Fatty acid elongation and wax biosynthesis | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
BnaA03g37090D | AT3G23530 | Unknown | Cyclopropane-fatty-acyl-phospholipid synthase |
BnaA03g36540D | AT4G11850 | Phospholipid signaling | Phospholipase D gamma 1 (PLDGAMMA1) |
BnaC07g33970D | AT4G16820 | Prokaryotic galactolipid, sulfolipid, and phospholipid synthesis 2 | Alpha/beta-hydrolases superfamily protein |
BnaC07g34360D | AT4G17483 | Unknown | Alpha/beta-hydrolases superfamily protein |
BnaA01g12060D | AT4G22240 | Unknown | Plastid-lipid associated protein PAP/fibrillin family protein |
BnaA01g12140D | AT4G22330 | Sphingolipid biosynthesis 2 | ATCES1 |
BnaA01g12150D | AT4G22340 | Prokaryotic galactolipid, sulfolipid, and phospholipid synthesis 1 | Cytidinediphosphate diacylglycerol synthase 2 (CDS2) |
BnaA01g12260D | AT4G22520 | Fatty acid elongation and wax biosynthesis | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
BnaA01g12290D | AT4G22550 | Prokaryotic galactolipid, sulfolipid, and phospholipid synthesis 1 | Phosphatidic acid phosphatase (PAP2) family protein |
BnaA01g12350D | AT4G22640 | Fatty acid elongation and wax biosynthesis | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |