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Table 1 Number of MAGs assigned to different categories according to their quality

From: New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters

 MAGs number before clustering (ANI) MAGs number after clustering (ANI)
HQ MAGs
Cp > 90%, Ct < 5%
1628HQ MAGs selected from clusters441
HQ MAGs identified once355
MHQ MAGs
90% > Cp ≥70%, 10% > Ct > 5%
1316MHQ MAGs selected from clusters170
MHQ MAGs identified once435
MQ MAGs
50% ≥ Cp > 70%, 10% > Ct > 5%
526MQ MAGs selected from clusters15
MQ MAGs identified once219
LQ MAGs
Cp < 50%
1436  
Contaminated MAGs
Ct > 10%
288  
Total5194Total1635
  1. ANI genome-wide average nucleotide identity
  2. MAGs belonging to one cluster generated during ANI calculation are indicated as “Selected from clusters”, while MAGs not clustered at more than 95% ANI are indicated as “identified once”