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Table 6 Genes that were found to have similar differential expression in strains ORCB001 and ORCB002, each compared to their common genetic parent strain JWCB005

From: Gene targets for engineering osmotolerance in Caldicellulosiruptor bescii

Locus tag

Annotation

Average log2(ORCB002/JWCB005) across three osmolarity conditions

Average log2(ORCB001/JWCB005) across three osmolarity conditions

B5X54_RS00980

Endo-1,4-beta xylanase

− 4.1

− 4.2

B5X54_RS05305

Hypothetical

− 4.9

− 2.5

B5X54_RS05310

Hypothetical

− 4.3

− 2.4

  1. Values are average differential log-fold changes observed for the indicated gene across three indicated high-osmolarity conditions (glucose, glycerol, sodium chloride). As these genes were similarly differentially expressed in strains showing different growth phenotypes, it is unlikely these genes are contributing to observed phenotype differences, and were not considered in this study. All values are statistically significant (Wald test, Benjamini–Hochberg adjusted p value < 0.05, n = 3)