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Table 2 Biochemical reactions corresponding to the names of the reactions

From: Carbon migration and metagenomic characteristics during anaerobic digestion of rice straw

Name

Reaction

R00235

ATP + acetate + CoA ⟺⟺ AMP + diphosphate + acetyl-CoA

R00351

Citrate + CoA ⟺ Acetyl-CoA + H2O + oxaloacetate

R00230

Acetyl-CoA + orthophosphate ⟺ CoA + acetyl phosphate

R09096

Acetyl-CoA + 5,6,7,8-tetrahydromethanopterin ⟺ CoA + 5-methyl-5,6,7,8-tetrahydromethanopterin + CO

R01196

2 Reduced ferredoxin + acetyl-CoA + CO2 + 2H + ⟺ 2 oxidized ferredoxin + Pyruvate + CoA

R00199

ATP + pyruvate + H2O ⟺ AMP + Phosphoenolpyruvate + orthophosphate

R00658

2-Phospho-d-glycerate ⟺ Phosphoenolpyruvate + H2O

R01518

2-Phospho-d-glycerate ⟺ 3-Phospho-d-glycerate

R01513

3-Phospho-d-glycerate + NAD + ⟺ 3-Phosphonooxypyruvate + NADH + H+

R04173

O-Phospho-l-serine + 2-Oxoglutarate ⟺ 3-Phosphonooxypyruvate + l-Glutamate

R00582

O-Phospho-l-serine + H2O ⟺ l-Serine + orthophosphate

R09099

l-Serine + 5,6,7,8-Tetrahydromethanopterin ⟺ 5,10-Methylenetetrahydromethanopterin + Glycine + H2O

R04464

5,10-Methylenetetrahydromethanopterin + reduced coenzyme F420 ⟺ 5-methyl-5,6,7,8-tetrahydromethanopterin + coenzyme F420

R04347

5-Methyl-5,6,7,8-tetrahydromethanopterin + coenzyme M + 2 sodium cation(in) ⟺ 5,6,7,8-tetrahydromethanopterin + 2-(Methylthio)ethanesulfonate + 2 sodium cations (out)