Differential expression of starch and sucrose metabolic genes linked to varying biomass yield in Miscanthus hybrids

Table 1 RNA-seq libraries used in this study

Group	Tissue	Genotype	Library	%Aligns^a	Covered transcripts^b
High NSC/low yield/fewer tillers	Root	112	LIB2338	75.6	57,716
	Root	90	LIB2341	76.6	55,950
	Stem	112	LIB2339	74.5	56,537
	Stem	90	LIB2342	75.4	59,459
	Leaf	112	LIB2340	75.7	54,316
	Leaf	90	LIB2343	75.2	52,190
Low NSC/high yield/many tillers	Root	120	LIB2344	74.8	56,046
	Root	18	LIB2347	73.2	59,909
	Stem	120	LIB2345	75.3	56,996
	Stem	18	LIB2348	76.7	56,875
	Leaf	120	LIB2346	74.2	56,948
	Leaf	18	LIB2349	76.5	54,692
Progenitors	Leaf	297 Msac	LIB2353	70.1	50,288
		297 Msac	SAM1160	75.2	51,213
		102 Msin	LIB2351	78.3	53,304
		102 Msin	SAM1164	81.6	53,967
	Stem	297 Msac	LIB2352	69	54,192
		297 Msac	SAM1158	73.4	54,426
		102 Msin	LIB2350	79.9	56,797
		102 Msin	SAM1162	80.7	55,736
	Root	297 Msac	SAM1159	71.3	56,043
		297 Msac	SAM1161^c	72.8	56,122
		102 Msin	SAM1163	74.2	59,043

Msac, M. sacchariflorus; Msin, M. sinensis; ^aProportion of reads that aligned in the reference; ^bTranscripts with at least one mapping reads; ^croot tip

ISSN: 2731-3654