|
Group
|
Tissue
|
Genotype
|
Library
|
%Alignsa
|
Covered transcriptsb
|
|---|
|
High NSC/low yield/fewer tillers
|
Root
|
112
|
LIB2338
|
75.6
|
57,716
|
|
90
|
LIB2341
|
76.6
|
55,950
|
|
Stem
|
112
|
LIB2339
|
74.5
|
56,537
|
|
90
|
LIB2342
|
75.4
|
59,459
|
|
Leaf
|
112
|
LIB2340
|
75.7
|
54,316
|
|
90
|
LIB2343
|
75.2
|
52,190
|
|
Low NSC/high yield/many tillers
|
Root
|
120
|
LIB2344
|
74.8
|
56,046
|
|
18
|
LIB2347
|
73.2
|
59,909
|
|
Stem
|
120
|
LIB2345
|
75.3
|
56,996
|
|
18
|
LIB2348
|
76.7
|
56,875
|
|
Leaf
|
120
|
LIB2346
|
74.2
|
56,948
|
|
18
|
LIB2349
|
76.5
|
54,692
|
|
Progenitors
|
Leaf
|
297 Msac
|
LIB2353
|
70.1
|
50,288
|
|
297 Msac
|
SAM1160
|
75.2
|
51,213
|
|
102 Msin
|
LIB2351
|
78.3
|
53,304
|
|
102 Msin
|
SAM1164
|
81.6
|
53,967
|
|
Stem
|
297 Msac
|
LIB2352
|
69
|
54,192
|
|
297 Msac
|
SAM1158
|
73.4
|
54,426
|
|
102 Msin
|
LIB2350
|
79.9
|
56,797
|
|
102 Msin
|
SAM1162
|
80.7
|
55,736
|
|
Root
|
297 Msac
|
SAM1159
|
71.3
|
56,043
|
|
297 Msac
|
SAM1161c
|
72.8
|
56,122
|
|
102 Msin
|
SAM1163
|
74.2
|
59,043
|
- Msac, M. sacchariflorus; Msin, M. sinensis; aProportion of reads that aligned in the reference; bTranscripts with at least one mapping reads; croot tip
