Table 4 Regulons (set of genes regulated by a TF) significantly enriched in DEGs (or which TF was DE) and associated with “carbohydrate metabolism”, “generation of precursor metabolites and energy”, or “secondary metabolism” GO terms
TF | Regulon GO-EA | Regulon size | Regulon DE? | DE stem | DE leaf | DE root | TF DE? | TF description |
|---|---|---|---|---|---|---|---|---|
Misin01G049500 | Carb. Met | 30 | Yes | 4 | 6 | 2 | No | TSA1, tryptophan synthase alpha chain |
Misin01G452600 | Carb. Met | 39 | Yes | 8 | 6 | 1 | No | Homeodomain-leucine zipper transcription factor TaHDZipI-1 |
Misin02G383200 | Carb. Met | 21 | Yes | 4 | 0 | 0 | No | LBD1, LOB domain-containing protein 1 |
Misin03G207100 | Carb. Met | 14 | Yes | 3 | 0 | 0 | No | Beta-1,3-galactosyltransferase 7 |
Misin03G237200 | Sec. met | 19 | No | 0 | 2 | 0 | Leaf | ODORANT1 |
Misin03G365800 | Prec. Met | 13 | Yes | 4 | 3 | 1 | No | Putative MYB DNA-binding |
Misin04G236800 | Carb. Met & Prec. Met | 35 | Yes | 4 | 1 | 0 | No | TPA: putative HLH DNA-binding |
Misin04G243500 | Carb. Met | 87 | No | 2 | 2 | 0 | Leaf | Transcription factor bHLH137 |
Misin04G316000 | Sec. met | 17 | No | 0 | 3 | 0 | Leaf | Transcription factor ABORTED MICROSPORES-like |
Misin05G004600 | Sec. met | 18 | No | 2 | 0 | 0 | Stem | WRKY transcription factor 31 |
Misin05G170700 | Sec. met | 23 | Yes | 4 | 0 | 0 | No | Putative transcription factor bHLH041 |
Misin06G000800 | Carb. Met & Prec. Met | 24 | Yes | 6 | 8 | 2 | Leaf/Stem/Root | TPA: putative HLH DNA-binding |
Misin06G026100 | Sec. met | 22 | Yes | 6 | 0 | 0 | No | Putative transcription factor bHLH041 |
Misin06G170200 | Sec. met | 19 | No | 3 | 0 | 0 | Stem | Putative transcription factor bHLH041 |
Misin06G257300 | Prec. Met | 28 | Yes | 5 | 0 | 0 | Stem | HSF1, heat stress transcription factor C-1b |
Misin07G012200 | Sec. met | 29 | Yes | 4 | 0 | 0 | No | Catalase |
Misin07G160300 | Prec. Met | 11 | Yes | 3 | 2 | 1 | No | RNA polymerase I termination factor isoform X1 |
Misin07G253100 | Prec. Met | 69 | Yes | 7 | 3 | 2 | No | Hydroxymethylglutaryl-CoA synthase |
Misin07G375400 | Carb. Met & Prec. Met | 31 | No | 3 | 2 | 0 | Leaf | Ethylene-responsive transcription factor |
Misin08G219000 | Prec. Met | 58 | Yes | 2 | 5 | 1 | No | LAF1 |
Misin10G025900 | Prec. Met | 15 | Yes | 6 | 3 | 0 | No | Light-inducible protein CPRF2 |
Misin12G063100 | Carb. Met & Sec. Met | 23 | Yes | 5 | 1 | 0 | No | Ethylene-responsive transcription factor ERF113 |
Misin12G092100 | Carb. Met | 49 | No | 1 | 4 | 0 | Leaf | Putative 12-oxophytodienoate reductase 11 |
Misin13G183300 | Prec. Met | 38 | No | 2 | 1 | 0 | Stem | bHLH family |
Misin15G053900 | Sec. met | 23 | Yes | 6 | 2 | 0 | No | GLDP1, glycine dehydrogenase mitochondrial |
Misin16G048700 | Carb. Met | 59 | No | 1 | 4 | 0 | Leaf | MYB transcription factor |
Misin18G114300 | Prec. Met | 3 | No | 0 | 1 | 0 | Leaf | ODORANT1 |
MisinT099300 | Sec. met | 61 | Yes | 29 | 26 | 22 | No | Pentatricopeptide repeat-containing |