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Table 3 Putative genes involved in membrane glycerolipid biosynthesis and turnover in C. zofingiensis

From: The oleaginous astaxanthin-producing alga Chromochloris zofingiensis: potential from production to an emerging model for studying lipid metabolism and carotenogenesis

Gene name abbreviations

Gene ID

Gene description

References

JGI v5.2.3.2

GenBank

Glycolipid synthesis (MGDG, DGDG and SQDG)

GALE1

Cz12g16020

 

UDP-galactose 4-epimerase

 

GALE2

Cz08g10110

 

UDP-galactose 4-epimerase

 

MGD

Cz08g30040

 

Monogalactosyldiacylglycerol synthase

 

DGD1

Cz03g26070

 

Digalactosyldiacylglycerol synthase

 

DGD2

Cz10g17090

 

Digalactosyldiacylglycerol synthase

 

DGD3

Cz13g19030

 

Digalactosyldiacylglycerol synthase

 

UGPase

UNPLg00641

 

UDP-glucose pyrophosphorylase

 

SQD1

Cz03g31030

 

UDP-sulfoquinovose synthase

 

SQD2

Cz07g23140

 

Sulfoquinovosyldiacylglycerol synthase

 

PG and PI synthesis

CDS1

Cz10g20080

 

Phosphatidate cytidylyltransferase

 

CDS2

Cz01g36190

 

Phosphatidate cytidylyltransferase

 

PGPS

Cz01g26070

 

Phosphatidylglycerophosphate synthase

 

PGP

Cz12g07050

 

Phosphatidylglycerophosphatase

 

MIPS

Cz01g18130

 

myo-inositol-1-phosphate synthase

 

PIS1

Cz01g00060

 

phosphatidylinositol synthase

 

PIS2

Cz17g13240

 

phosphatidylinositol synthase

 

DGTS, PC and PE synthesis

SAS1

Cz15g18200

 

S-adenosylmethionine synthase

 

SAS2

Cz05g24030

 

S-adenosylmethionine synthase

 

BTA

Cz01g13260

 

Betaine lipid synthase

 

CHK

UNPLg00491

 

Choline kinase

 

CCT

Cz12g21150

 

Choline-phosphate cytidylyltransferase

 

EPT/CPT

Cz05g09130

 

Ethanolaminephosphotransferase/cholinephosphotransferase

 

ETK

Cz11g15030

 

Ethanolamine kinase

 

ECT

Cz05g17180

 

CDP-Ethanolamine synthase

 

Putative membrane lipid lipases

PGD1

Cz01g38020

 

Plastid Galactoglycerolipid Degradation1, Lipase class 3

 

–

Cz02g15090

 

Alpha/beta hydrolase family

 

–

Cz03g14190

 

Alpha/beta hydrolase family

 

–

Cz01g06170

 

Lipase, SF153

[40]

–

Cz12g10010

 

Lipase, SF153

[40]

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Biotechnology for Biofuels and Bioproducts

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