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Table 4 Twenty most highly expressed CAZyme-encoding genes during growth of T. terrestris LPH172 on Avicel

From: Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172

Transcript ID TPM CAZy domain(s) Putative function
TT_05546 12001 GH7-CBM1 Exoglucanase
TT_07456 8862 AA9 LPMO
TT_06655 8643 GH6 1,4-β-d-Glucan cellobiohydrolase
TT_08370 8271 AA9 LPMO
TT_06499 6276 CBM1 Feruloyl esterase
TT_00224 4790 GH5_5 Endoglucanase
TT_05797 4654 GH7-CBM1 Endoglucanase
TT_03075 4576 GH11-CBM1 Endo-1,4-β-xylanase
TT_04350 4537 AA9-CBM1 LPMO
TT_07210 3659 GH30_7 Glucosylceramidase
TT_08166 3512 CE5-CBM1 Acetylxylan esterase
TT_06407 3218 AA9 LPMO
TT_09000 3188 GH45 Endoglucanase
TT_01736 2677 AA9-CBM1 LPMO
TT_01019 2322 GH5_5 Endoglucanase
TT_04380 1599 AA3_1-AA8 Cellobiose dehydrogenase
TT_01839 1429 GH11 Endo-1,4-β-xylanase
TT_08161 1335 GH10-CBM1 Endo-1,4-β-xylanase
TT_03756 1104 GH72 1,3-β-Glucanosyltransferase
TT_01913 919 GH132 Secreted β-glucosidase
  1. TPM values indicate average normalized transcript levels from three biological replicates. CAZy domains were predicted by dbCAN2 and functions were annotated by BLASTp search against the UniProt/Swiss-Prot reference dataset