Skip to main content

Table 4 Twenty most highly expressed CAZyme-encoding genes during growth of T. terrestris LPH172 on Avicel

From: Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172

Transcript ID

TPM

CAZy domain(s)

Putative function

TT_05546

12001

GH7-CBM1

Exoglucanase

TT_07456

8862

AA9

LPMO

TT_06655

8643

GH6

1,4-β-d-Glucan cellobiohydrolase

TT_08370

8271

AA9

LPMO

TT_06499

6276

CBM1

Feruloyl esterase

TT_00224

4790

GH5_5

Endoglucanase

TT_05797

4654

GH7-CBM1

Endoglucanase

TT_03075

4576

GH11-CBM1

Endo-1,4-β-xylanase

TT_04350

4537

AA9-CBM1

LPMO

TT_07210

3659

GH30_7

Glucosylceramidase

TT_08166

3512

CE5-CBM1

Acetylxylan esterase

TT_06407

3218

AA9

LPMO

TT_09000

3188

GH45

Endoglucanase

TT_01736

2677

AA9-CBM1

LPMO

TT_01019

2322

GH5_5

Endoglucanase

TT_04380

1599

AA3_1-AA8

Cellobiose dehydrogenase

TT_01839

1429

GH11

Endo-1,4-β-xylanase

TT_08161

1335

GH10-CBM1

Endo-1,4-β-xylanase

TT_03756

1104

GH72

1,3-β-Glucanosyltransferase

TT_01913

919

GH132

Secreted β-glucosidase

  1. TPM values indicate average normalized transcript levels from three biological replicates. CAZy domains were predicted by dbCAN2 and functions were annotated by BLASTp search against the UniProt/Swiss-Prot reference dataset