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Table 5 Twenty most highly expressed CAZyme-encoding genes during growth of T. terrestris LPH172 on rice straw

From: Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172

Transcript ID TPM CAZy domain(s) Putative function
TT_01839 8312 GH11 Endo-1,4-β-xylanase
TT_07456 963 AA9 LPMO
TT_08370 462 AA9 LPMO
TT_07992 418 GT15 Glycolipid 2-α-mannosyltransferase
TT_08797 400 CE5 Cutinase
TT_08097 276 GT32 Initiation-specific α-1,6-mannosyltransferase
TT_05010 249 GH25 N,O-Diacetylmuramidase
TT_01081 241 GH131 Endoglucanase
TT_04352 234 AA9 LPMO
TT_05489 178 GT2 Dolichol-phosphate mannosyltransferase subunit
TT_03075 171 GH11-CBM1 Endo-1,4-β-xylanase
TT_06407 167 AA9 LPMO
TT_08740 166 CBM52 Uncharacterized secreted protein
TT_09851 162 GH128 Alkali-sensitive linkage protein
TT_03483 158 GT15 Mannosyltransferase
TT_05929 139 GT31 β-1,3-N-Acetylglucosaminyltransferase
TT_03756 135 GH72 1,3-β-Glucanosyltransferase
TT_06012 125 CE16 Acetylesterase
TT_01913 119 GH132 Secreted β-glucosidase
TT_03770 117 AA9 LPMO
  1. TPM values indicate average normalized transcript levels from three biological replicates. CAZy domains were predicted by dbCAN2 and functions were annotated by BLASTp search against the UniProt/Swiss-Prot reference dataset