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Table 5 Twenty most highly expressed CAZyme-encoding genes during growth of T. terrestris LPH172 on rice straw

From: Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172

Transcript ID

TPM

CAZy domain(s)

Putative function

TT_01839

8312

GH11

Endo-1,4-β-xylanase

TT_07456

963

AA9

LPMO

TT_08370

462

AA9

LPMO

TT_07992

418

GT15

Glycolipid 2-α-mannosyltransferase

TT_08797

400

CE5

Cutinase

TT_08097

276

GT32

Initiation-specific α-1,6-mannosyltransferase

TT_05010

249

GH25

N,O-Diacetylmuramidase

TT_01081

241

GH131

Endoglucanase

TT_04352

234

AA9

LPMO

TT_05489

178

GT2

Dolichol-phosphate mannosyltransferase subunit

TT_03075

171

GH11-CBM1

Endo-1,4-β-xylanase

TT_06407

167

AA9

LPMO

TT_08740

166

CBM52

Uncharacterized secreted protein

TT_09851

162

GH128

Alkali-sensitive linkage protein

TT_03483

158

GT15

Mannosyltransferase

TT_05929

139

GT31

β-1,3-N-Acetylglucosaminyltransferase

TT_03756

135

GH72

1,3-β-Glucanosyltransferase

TT_06012

125

CE16

Acetylesterase

TT_01913

119

GH132

Secreted β-glucosidase

TT_03770

117

AA9

LPMO

  1. TPM values indicate average normalized transcript levels from three biological replicates. CAZy domains were predicted by dbCAN2 and functions were annotated by BLASTp search against the UniProt/Swiss-Prot reference dataset