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Table 3 Information of mapped QTLs for monosaccharides, acid-soluble/insoluble lignin, and biomass saccharification

From: Integrated NIRS and QTL assays reveal minor mannose and galactose as contrast lignocellulose factors for biomass enzymatic saccharification in rice

Traits

QTL

Chr

Position (cM)

Marker interval

LODa

PVE (%)b

Mannose

qMan-1

1

0–4

RM3252–RM495

3.2

5.3

 

qMan-8

8

29–44

RM38–RM310

15.5

33.0

 

qMan-9

9

68–76

RM434–RM107

2.1

3.4

Galactose

qGal-1

1

120–128

RM595–RM8229

2.5

4.6

 

qGal-2

2

37–42

RM492–RM174

2.3

4.0

 

qGal-8

8

34–46

RM1376–RM547

13.1

29.8

 

qGal-10

10

34–52

RM1126–RM467

2.0

7.8

ASL

qASL-1

1

122–136

RM449–RM5

2.1

3.8

 

qASL-6

6

92–99

RM557–RM136

2.2

3.9

 

qASL-8

8

34–46

RM1376–RM547

12.2

27.3

 

qASL-10

10

30–47

BT–RM467

3.0

8.6

 

qASL-12

12

47–68

RM4609–RM235

2.5

6.3

AIL

qAIL-1

1

0–4

RM3252–RM495

2.8

5.6

 

qAIL-8

8

14–33

RM407–RM1376

4.8

11.7

 

qAIL-9

9

70–75

RM434–RM242

2.0

3.9

Glc-Rel1c

qGlc-Rel1-1a

1

0–4

RM3252–RM495

3.4

6.3

 

qGlc-Rel1-1b

1

116–122

RM562–RM449

3.8

7.0

 

qGlc-Rel1-8a

8

0–6

RM152–RM2702

4.9

10.0

 

qGlc-Rel1-8b

8

28–44

RM407–RM310

2.2

4.5

 

qGlc-Rel1-9

9

70–76

RM434–RM107

2.6

4.6

  1. aLogarithm of odds
  2. bPercentage of the trait variance explained by the QTL
  3. cGlucose released after enzymatic digestion following 1% (m/v) NaOH pretreatment