Skip to main content

Table 2 Xylanolytic CAZyme predicted from whole-genome sequenced xylanolytic yeasts

From: CAZyme prediction in ascomycetous yeast genomes guides discovery of novel xylanolytic species with diverse capacities for hemicellulose hydrolysis

Clade

Species

CE (332/332)

GH3 (263/332)

GH5 (324/332)

GH10(5/332)

GH11 (1/332)

GH30 (11/332)

GH43 (22/332)

GH51 (39/332)

GH62 (1/332)

GH67 (4/332)

GH115 (28/332)

Total

Trichomonascaceae

Sp. europaea

CE1, CE4, CE15

GH3(11)

GH5_5(2), GH5_9(2), GH5_12(2), GH5_22(4), GH5_49

GH10(2)

 

GH30_5, GH30_7

GH43_14, GH43_24

GH51

 

GH67

GH115(3)

36

Su. lignohabitans

CE1(2), CE4(3), CE15

GH3(5)

GH5_9(2), GH5_12(2), GH5_22(2), GH5_49

GH10(2)

 

GH30_7

 

GH51

  

GH115

23

B. peoriensis

CE1, CE4

GH3(15)

GH5_9(3), GH5_12(2), GH5_22(5), GH5_49

GH10

 

GH30_3(3)

 

GH51

   

33

B. mokoenaii

CE1, CE4

GH3(8)

GH5, GH5_5, GH5_7(2), GH5_9(2), GH5_12, GH5_22(2), GH5_49

 

GH11

GH30_5, GH30_7

GH43_6, GH43_24

GH51(3)

GH62

GH67

GH115(2)

32

B. adeninivorans

CE1, CE4(2)

GH3(8)

GH5_9(3), GH5_12(2), GH5_44, GH5_47

  

GH30_3

GH43_6

GH51

 

GH67

 

22

B. proliferans

CE1(2), CE4

GH3(12)

GH5_5(3), GH5_9(2), GH5_12, GH5_31, GH5_49

  

GH30_3

 

GH51(3)

   

27

B. serpentis

CE1, CE4

GH3(5)

GH5, GH5_9(3), GH5_12, GH5_22, GH5_49

  

GH30_3(2)

 

GH51(2)

   

18

B. raffinosifermentans

CE1, CE4(2), CE5(6)

GH3(9)

GH5_9(3), GH5_12(2), GH5_49

  

GH30_3

GH43_6

GH51

 

GH67

 

27

CUG-Ser1

Spa. passalidarum

CE1, CE4(2)

GH3(9)

GH5, GH5_9(3), GH5_22, GH5_49

       

GH115

19

Sc. lignosus

CE1, CE4,

GH3(7)

GH5_5, GH5_9(3), GH5_12, GH5_22(2), GH5_49

GH10(2)

      

GH115

20

Sc. stipitis

CE1, CE4,

GH3(7)

GH5_9(2), GH5_12, GH5_22 (3), GH5_49

GH10

      

GH115

17

Phaff.

W. canadensis

CE1(3), CE4

GH3(5)

GH5_9(2), GH5_12, GH5_22, GH5_49

        

14

  1. CAZyme families marked in bold are unique enzymes to the species within the 332-yeast dataset. Total number of species containing each CAZyme family is marked by (x/332). Copy number of each enzyme is stated in parenthesis next to the enzyme
  2. CE carbohydrate esterase, GH glycoside hydrolase, Phaff. Phaffomycetace