From: SorGSD: updating and expanding the sorghum genome science database with new contents and tools
Name | URL/description | PubMed ID |
---|---|---|
Comprehensive genome databases and analysis platforms | ||
 Phytozome | [18] | |
Plant genome database portal and analysis platform | 22110026 | |
 Gramene | [19] | |
Plant genome database portal and analysis platform | 33170273 | |
 GOLD | [20] | |
Genomes online database | 33152092 | |
Sorghum included plant secondary databases | ||
 PIGD | [21] | |
A database for intronless genes in Poaceae | 25270086 | |
 PlantTFDB | [22] | |
A database of plant transcription factors | 27924042 | |
 DNApod | [23] | |
DNA polymorphism annotation database | 28234924 | |
 PceRBase | [24] | |
A database of plant competing endogenous RNA | 28053167 | |
 PtRFdb | [25] | |
A database for plant tRNA-derived fragments | 29939244 | |
 GreenPhylDB | [26] | |
A comparative pangenomic database for plant genomes | 33237299 | |
Sorghum specific secondary databases | ||
 MOROKOSHI | [27] | |
Sorghum transcriptome database | 25505007 | |
 SorGSD | [31] | |
Sorghum SNP database | 26884811 | |
 PGSB | [28] | |
Plant genome and systems biology | 26527721 | |
 SorghumFDB | [29] | |
A database for sorghum functional genomics | 27352859 | |
 Sorghum QTL Atlas | [30] | |
Tool for searching QTL landscape in sorghum | 30343386 | |
 Sorghum genomics | N/A | |
Functional Gene Discovery Platform for Sorghum |