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Table 1 Online databases for sorghum genome

From: SorGSD: updating and expanding the sorghum genome science database with new contents and tools

Name URL/description PubMed ID
Comprehensive genome databases and analysis platforms
 Phytozome https://phytozome.jgi.doe.gov/ [18]
Plant genome database portal and analysis platform 22110026
 Gramene http://www.gramene.org/ [19]
Plant genome database portal and analysis platform 33170273
 GOLD https://gold.jgi.doe.gov/ [20]
Genomes online database 33152092
Sorghum included plant secondary databases
 PIGD http://pigd.ahau.edu.cn/ [21]
A database for intronless genes in Poaceae 25270086
 PlantTFDB http://planttfdb.gao-lab.org/ [22]
A database of plant transcription factors 27924042
 DNApod http://tga.nig.ac.jp/dnapode [23]
DNA polymorphism annotation database 28234924
 PceRBase http://bis.zju.edu.cn/pcernadb/ [24]
A database of plant competing endogenous RNA 28053167
 PtRFdb http://www.nipgr.res.in/PtRFdb [25]
A database for plant tRNA-derived fragments 29939244
 GreenPhylDB https://www.greenphyl.org/ [26]
A comparative pangenomic database for plant genomes 33237299
Sorghum specific secondary databases
 MOROKOSHI http://sorghum.riken.jp/ [27]
Sorghum transcriptome database 25505007
 SorGSD http://sorgsd.big.ac.cn/ [31]
Sorghum SNP database 26884811
 PGSB http://pgsb.helmholtz-muenchen.de/plant/sorghum/ [28]
Plant genome and systems biology 26527721
 SorghumFDB http://structuralbiology.cau.edu.cn/sorghum/ [29]
A database for sorghum functional genomics 27352859
 Sorghum QTL Atlas https://aussorgm.org.au/sorghum-qtl-atlas/ [30]
Tool for searching QTL landscape in sorghum 30343386
 Sorghum genomics https://www.purdue.edu/sorghumgenomics/ N/A
Functional Gene Discovery Platform for Sorghum