Name | Description | References |
---|---|---|
Plasmids | ||
pCOM_AlkL | pCOM10 vector containing AlkL gene; KmR | [22] |
pBTL10 | pCOM10 vector containing AlkBGTL genes; KmR | [50] |
pBGTL-Atf1 | pCOM10 vector containing AlkBGTL-Atf1 genes; KmR | [19] |
pSEVAb628 | Expression vector; oriV(RK2); XylS, Pm; GmR | [47] |
pSEVAb658 | Expression vector; oriV(RSF1010); XylS, Pm; GmR | [47] |
pSEVAb628-AlkS | pSEVAb628 vector containing Pm → AlkS; GmR | This work |
pSEVAb658-B*G*TLA* | pSEVAb658 vector containing Pm → AlkB*G*TL-Atf1*; GmR | This work |
pET26b-EstX | pET26b vector containing T7 → EstX, X represents each putative esterase gene; KmR | This work |
pGNW2 | Suicide vector used for gene deletion in P. putida KT2440; oriV(R6K) containing P14g → msfGFP; KmR | [43] |
pGNW2-ΔCrc | Derivative of vector pGNW2 containing HRs to delete Crc (PP_5292) | This work |
pGNW2-ΔCyoB | Derivative of vector pGNW2 containing HRs to delete CyoB (PP_0813) | This work |
pGNW2-ΔEstX | Derivative of vector pGNW2 containing HRs to delete EsteraseX (Table 2) | This work |
pGNW2-PP_2047-48 | Derivative of vector pGNW2 containing HRs to delete PP_2047-48 | This work |
pGNW2-PP_2136-37 | Derivative of vector pGNW2 containing HRs to delete PP_2136-37 | This work |
pGNW2-PP_2214-18 | Derivative of vector pGNW2 containing HRs to delete PP_2214-18 | This work |
Strains | ||
P. putida KT2440 | Wild-type strain, derived from P. putida mt-2[51] | [52] |
ΔCrc | P. putida KT2440ΔCrc | This work |
ΔCyoB | P. putida KT2440ΔCyoB | This work |
ΔCrcΔCyoB | P. putida KT2440ΔCrcΔCyoB | This work |
ΔEstBCPZ | P. putida KT2440ΔEstBCPZ | This work |
ΔEst12/K | P. putida KT2440ΔEst12/K | This work |
ΔEstBCPZ12/K | P. putida KT2440ΔEstBCPZΔEst12/K | This work |
P. putida ΔBOX | P. putida KT2440ΔPP_2047-48ΔPP_2136-37ΔPP_2214-18 | This work |
P-L | P. putida KT2440 harboring pCOM_alkL | This work |
P-BGTL | P. putida KT2440 harboring pBTL10 | This work |
P-BGTLA | P. putida KT2440 harboring pBGTL-Atf1 | This work |
ΔCrc-BGTL | P. putida KT2440ΔCrc harboring pBTL10 | This work |
ΔCyoB-BGTL | P. putida KT2440ΔCyoB harboring pBTL10 | This work |
ΔCrcΔCyoB- BGTL | P. putida KT2440ΔCrcΔCyoB harboring pBTL10 | This work |
ΔCrc-BGTLA | P. putida KT2440ΔCrc harboring pBGTL-Atf1 | This work |
ΔCyoB-BGTLA | P. putida KT2440ΔCyoB harboring pBGTL-Atf1 | This work |
ΔCrc-BGTLAS | P. putida KT2440ΔCrc harboring pBGTL-Atf1, and pSEVAb628-alkS | This work |
ΔCyoB-BGTLAS | P. putida KT2440ΔCyoB harboring pBGTL-Atf1, and pSEVAb628-alkS | This work |
P-B*G*TLA* | P. putida KT2440 harboring pSEVAb658-B*G*TLA* | This work |
ΔEst12/K- B*G*TLA* | P. putida KT2440ΔEst12/K harboring pSEVAb658-B*G*TLA* | This work |
E. coli blank | E. coli NEBT7 harboring pET26b | This work |
E. coli-EstX | E. coli NEBT7 harboring pET26b-EstX | This work |