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Table 2 The top 10 proteins interacting with PoCreA identified through TAP-MS

From: Carbon catabolite repression involves physical interaction of the transcription factor CRE1/CreA and the Tup1–Cyc8 complex in Penicillium oxalicum and Trichoderma reesei

Rank

Gene locus

emPAIa

P. oxalicum 114-2

S. cerevisiae S288C

Predicted function

Protein

Homologue

Identity %

E value

Locationb

1st

PDE_03168

2.01 × 102

PoCreA

Mig1

68

2e−29

Nucleus and cytoplasm

Sequence-specific DNA binding transcription factor involved in the regulation of transcription by RNA polymerase II in response to glucose and starvation

2nd

PDE_01024

11.18

PoTup1

Tup1

48

2e−128

Nucleus

General repressor of transcription, forms complex with Cyc8p

3rd

PDE_03177

2.16

PoCyc8

Cyc8

58

7e−149

Nucleus

General repressor of transcription, forms complex with Tup1p

4th

PDE_04157

1.22

Initiation-specific alpha-1,6-mannosyltransferase

5th

PDE_09900

0.74

Thi13

66

3e−175

Unknown

Protein involved in synthesis of the thiamine precursor HMP

6th

PDE_02746

0.50

Putative protein

7th

PDE_09681

0.49

Sps19

49

2e−87

Peroxisome

Peroxisomal 2,4-dienoyl-CoA reductase involved in fatty acid catabolism and sporulation

8th

PDE_07279

0.47

Atp2

79

0.0

Mitochondrion

Subunit of the catalytic core of the F1 sector of mitochondrial F1F0 ATP synthase

9th

PDE_04469

0.33

Cct2

74

0.0

Cytoplasm

Subunit of the chaperonin-containing T-complex (TriC) that mediates protein folding

10th

PDE_03408

0.32

Cdc19

66

0.0

Cytoplasm

Pyruvate kinase that catalyzes the final step in glycolysis, the conversion of phosphoenolpyruvate to pyruvate, which is then utilized in anaerobic or aerobic respiration

  1. –: No significant similarity found
  2. aemPAI is the Exponentially Modified Protein Abundance Index of three samples. Every Peptide count of each sample is listed in Additional file 3: Spreadsheet S1
  3. bData from Saccharomyces Genome Database (www.yeastgenome.org)