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Table 1 SNV and InDel mutants in E. coli AST-4AS

From: Adaptive laboratory evolution and shuffling of Escherichia coli to enhance its tolerance and production of astaxanthin

Type Amounts of mutant Amounts of gene
SNV 91  
 Synonymous SNV 27 21
 Nonsynonymous SNV 51 48
 Stop gaining SNV 3 3
 Start lost SNV 1 1
 Intergenic region 9  
InDel 33  
 Frameshift variant 10 9
 Intergenic region 23  
  1. Mapped reads ratio of 98.83%, covered bases of 4,641,652 bp, coverage of 99.98%, unique read ratio of 97.11, the SNVs and InDels calling were performed with the stand_call_conf 50 and stand_emit_conf 10.0