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Table 1 SNV and InDel mutants in E. coli AST-4AS

From: Adaptive laboratory evolution and shuffling of Escherichia coli to enhance its tolerance and production of astaxanthin

Type

Amounts of mutant

Amounts of gene

SNV

91

 

 Synonymous SNV

27

21

 Nonsynonymous SNV

51

48

 Stop gaining SNV

3

3

 Start lost SNV

1

1

 Intergenic region

9

 

InDel

33

 

 Frameshift variant

10

9

 Intergenic region

23

 
  1. Mapped reads ratio of 98.83%, covered bases of 4,641,652 bp, coverage of 99.98%, unique read ratio of 97.11, the SNVs and InDels calling were performed with the stand_call_conf 50 and stand_emit_conf 10.0
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Biotechnology for Biofuels and Bioproducts

ISSN: 2731-3654

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