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Table 3 Upregulated genes in KAC1801 of the “carboxylic acid metabolic process” category

From: Development of a stable semi-continuous lipid production system of an oleaginous Chlamydomonas sp. mutant using multi-omics profiling

Protein ID (Chlamydomonas reinhardtii) Gene IDs assigned by AUGUSTUS Product Gene name logFC p-Value FDR
PNW82533 g3710 Isocitrate lyase ICL1 6.3 2.1 × 10–9 7.0 × 10–7
PNW84433 g6394 Malate synthase MS1 5.2 2.6 × 10–9 8.1 × 10–7
PNW77089 g10773 Glycerol-3-phosphate dehydrogenase [NAD + dependent] - 3.7 3.6 × 10–8 4.8 × 10–6
PNW71982 g10416 Acyl-coenzyme A oxidase 3.5 2.3 × 10–8 3.6 × 10–6
PNW77134 g2963 Threonine aldolase family protein 3.4 2.2 × 10–7 1.7 × 10–5
PNW78716 g5722 Aspartate aminotransferase AST1 3.2 1.7 × 10–8 2.9 × 10–6
PNW85164 g2104 Cysteine dioxygenase CDO1 2.8 6.2 × 10–5 1.3 × 10–3
PNW87457 g1547 N-Acetylglutamate synthase LCI8 2.7 2.1 × 10–6 8.8 × 10–5
PNW76677 g6902 Acyl-coenzyme A oxidase 2.6 9.2 × 10–6 2.7 × 10–4
PNW71299 g11698 EF-hand domain-containing protein 2.4 7.8 × 10–5 1.5 × 10–3
PNW74464 g11056 Glyceraldehyde-3-phosphate dehydrogenase GAPC 2.3 4.2 × 10–5 9.1 × 10–4
PNW70527 g9413 Acetyl-CoA acyltransferase ATO1 2.0 7.0 × 10–6 2.2 × 10–4
PNW75961 g8276 Phosphofructokinase family protein PFK2 1.9 2.4 × 10–5 5.9 × 10–4
PNW85759 g1229 Acetohydroxyacid dehydratase AAD1 1.9 1.5 × 10–5 4.0 × 10–4
PNW82425 g3665 Arogenate/prephenate dehydrogenase AGD1 1.9 6.6 × 10–6 2.1 × 10–4
PNW77127 g2953 Malate dehydrogenase MDH2 1.9 3.5 × 10–5 7.8 × 10–4
PNW72803 g9028 SOR_SNZ domain-containing protein 1.8 1.5 × 10–5 3.9 × 10–4
PNW75447 g7819 6-Phosphogluconate dehydrogenase, decarboxylating gnd 1.7 1.0 × 10–5 2.9 × 10–4
PNW85614 g2474 Malate dehydrogenase MDH2 1.6 5.6 × 10–5 1.2 × 10–3
PNW75399 g7836 Cysteine desulfurase SUFS1 1.5 3.1 × 10–4 4.8 × 10–3
PNW70105 g11069 Pseudouridine synthase domain-containing protein 1.7 1.4 × 10–4 2.4 × 10–3