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Table 2 Primary plasmids used in this study

From: Engineering Yarrowia lipolytica for the sustainable production of β-farnesene from waste oil feedstock

Name

Description

Reference

YLEP-Leu/nat

Y. lipolytica episomal vector, ut8 promoter with CYC1 terminator, Leu2 or nourseothricin selection marker

[47]

pki-2/nat

Y. lipolytica integrative vector, hp4d promoter with XPR2 terminator, TEF promoter with CYC1 terminator, URA3 or nourseothricin selection marker

[12]

YLEP-Leu-Aan

YLEP-Leu vector containing codon-optimized AanFS under ut8 promoter

This study

YLEP-Leu-Him

YLEP-Leu vector containing codon-optimized HimFS under ut8 promoter

This study

YLEP-Leu-Mas

YLEP-Leu vector containing codon-optimized MasFS under ut8 promoter

This study

YLEP-Leu-Pme

YLEP-Leu vector containing codon-optimized PmeFS under ut8 promoter

This study

pET28a-Aan

pET28a vector containing codon-optimized AanFS under T7 promoter

This study

pET28-mAan

pET28a vector containing codon-optimized AanFSK197T/F180H under T7 promoter

This study

YLEP-Leu-Aan-ERG20

YLEP-Leu vector containing AanFS under ut8 promoter and GPD-ERG20-XPR2 fragments

This study

YLEP-Leu-AanERG20

YLEP-Leu vector containing fusion gene of codon-optimized AanFS and ERG20 (AanFSERG20) with GGGGS linker and ERG20 is at the 3' end

This study

YLEP-Leu-ERG20Aan

YLEP-Leu vector containing fusion gene of codon-optimized AanFS and ERG20 (ERG20AanFS) with GGGGS linker and AanFS is at the 3' end

This study

YLEP-Leu-ERG20mAan

YLEP-Leu-ERG20Aan vector with the K197T/F180H mutation in AanFS

This study

pki-ERG12-IDI-ERG20mAan

pki-2 vector containing ERG20FSK197T/F180H under hp4d promoter, ERG12 under ut8 promoter and TEF-IDI-CYC1 fragments

This study

114-GPPS-ERG8-ERG19

114-EXP-FBA vector containing GPPS under EXP promoter, GPD-ERG8-XPR2 and TEF-ERG19-CYC1 fragments

This study

pki-AtoB-HMGR-HMGS

pKi-2 vector containing codon-optimized AtoB under TEF promoter, HMGS under hp4d promoter, and ut8-HMGR-CYC1 fragments

This study

pki-AtoB-HMGR-HMGS-ePTS1

The ePTS1 peroxisome localization signal was fused at C-terminal of AtoB, HMGR and HMGS separately of pki-AtoB-HMGR-HMGS plasmid

This study

YLEP-nat-FAA1

YLEP-nat vector containing FAA1 gene under ut8 promoter

This study

YLEP-nat-MFE2

YLEP-nat vector containing MFE1 gene under ut8 promoter

This study

YLEP-nat-PAT1

YLEP-nat vector containing PAT1 gene under ut8 promoter

This study

YLEP-nat-PEX10

YLEP-nat vector containing PEX10 gene under ut8 promoter

This study

YLEP-nat-POT1

YLEP-nat vector containing POT1 gene under ut8 promoter

This study

pki-nat-PXA1/2

pki-nat vector containing PXA1 and PXA2 genes

This study

pki-nat-TGL3/4

pki-nat vector containing TGL3 and TGL4 genes

This study

pki-nat-POX2/3

pki-nat vector containing POX2 and POX3 genes

This study

pki-nat-YHM2-AMPD

pki-nat vector containing AMPD and YHM2 genes

This study

pki-Bleor-ACL1/2

pki-Bleor vector containing ACL1 and ACL2 genes with bleomycin selection marker

This study

pCAS1yl-gDGA1

pCAS1yl plasmid with gRNA of DGA1 and bleomycin selection marker

This study

pCAS1yl-gDGA2

pCAS1yl plasmid with gRNA of DGA2 and bleomycin selection marker

This study

pCAS1yl-gDGA2

pCAS1yl plasmid with gRNA of DGA2 and bleomycin selection marker

This study