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Table 1 Construction and functional screening of metagenomic libraries to identify degradative enzymes

From: Arabinan saccharification by biogas reactor metagenome-derived arabinosyl hydrolases

Name of libraries

Fosmid backbones

Origins

Number of clones

Size of inserts

Positive clones for sequencing

ED library

pCT3FK

Elephant feces

1372

 ~ 40 kb

3 (2 CMCasesa, 1 xylanase)

BM1T library

pCT3FK

Thermophilic digestate, fermenter

980

 ~ 40 kb

15 (3 arabinoxylanases, 9 dual activitiesb, 3 xylanases)

MOD18 library

pCC1FOS

Thermophilic digestate, fermenter, 50 °C

20000

 ~ 40 kb

18 (4 arabinanases, 14 CMCases)

T1T2 library

pCC1FOS

Thermophilic digestate, fermenter, 55 °C

5000

 ~ 40 kb

19 (2 arabinanases, 2 xylanases, 15 CMCases)

Others

pCC1FOS/pCT3FK

various

5424

 ~ 40 kb

0

Total

  

32776

 

55

  1. Positive clones were screened by using chromogenic polysaccharide hydrogel (CPH) substrates and insoluble chromogenic biomass (ICB) substrates
  2. aCMCases: carboxymethyl cellulases
  3. bDual activities: both xylanase and arabinoxylanase activities