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Table 4 Available crystal structures of 2-dehydro-3-deoxy-aldopentonate dehydratases

From: Structure and function of aldopentose catabolism enzymes involved in oxidative non-phosphorylative pathways

Enzyme

(Short name in this article)

EC number

PDB code

Organism

Resolution (Ã…)

Ligands

Quaternary structure

Refs.

FAH superfamily

 2-Dehydro-3-deoxy-d-aldopentonate dehydratase

 (Ss DPDHT)

EC 4.2.1.43

2Q18

2Q19

2Q1A

2Q1C

2Q1D

3BQB

Sulfolobus solfataricus

2.10

3.00

2.50

2.80

2.70

2.70

–

–

Mg2+, 2-oxobutyrate

Ca2+, 2-oxobutyrate

Mg2+, 2,5-dioxopentanoate

Mg2+

Tetramer

[78]

DHDPS/NAL superfamily

 2-Dehydro-3-deoxy-l-aldopentonate dehydratase

 (Ab LPDHT)

 EC 4.2.1.43

3FKK

3FKR

7C0C

7C0D

7C0E

Azospirillum brasilense

2.10

1.80

1.90

1.60

2.20

–

Pyruvate

–

Hydroxypyruvate

2-oxobutyrate

Tetramer

[79,80,81]