Fig. 3

Expression dynamics and network of predicted transcriptional influences. a–c Top panels show TR expression dynamics: each profile is labeled with the relevant TR it represents. d–f Network of predicted transcriptional influences from TRs (circle nodes) on enriched GO terms (square nodes) through transcriptional modules (edges). Edge color indicates transcriptional activation (red) or repression (blue) influenced of a TR on the transcriptional module. Edge thickness is inversely proportional to the distance between the TR and the transcriptional module. Nodes are colored using the same pattern as in Fig. 1c, d, e.g., blue represents a differential expression acquired at time 18 min after N starvation