Table 2 Hierarchical clustering in three smaller clusters a, b and c of the 17 more abundant CAZy proteins of SBP.F.1.2.11 compared to CBS 203.75 and CBS 663.74 (Cluster 1 within Fig. 4). The naming of the CAZy proteins refers to CBS 203.75. The data shows the fold change between SBP.F.1.2.11 and CBS 203.75, and SBP.F.1.2.11 and CBS 663.74 CAZymes. The data can also be found in Additional file 2: Table S3. Each of data point represents proteomics data of an independent cultivation
CAZy protein | CAZy module(s) | SBP_1-VS-203_1 | SBP_2-VS-203_2 | SBP_1-VS-663_1 | SBP_2-VS-663_2 |
|---|---|---|---|---|---|
Cluster 1a | |||||
 Myche1_750210 | CE16 | 1.44 | 1.63 | 1.24 | 1.63 |
 Myche1_760434 | GH2 | 1.39 | 2.10 | 1.30 | 1.29 |
 Myche1_690625 | GH3 | 1.67 | 1.63 | 1.07 | 1.17 |
 Myche1_760525 | GH31 | 1.72 | 2.06 | 1.09 | 1.31 |
 Myche1_810773 | GH36 | 1.48 | 1.24 | 1.56 | 1.57 |
 Myche1_753360 | GH74 | 1.11 | 1.01 | 1.20 | 1.04 |
 Myche1_341463 | GH76 | 1.95 | 1.65 | 1.92 | 1.88 |
 Myche1_684862 | GH81 | 1.95 | 1.53 | 1.80 | 2.43 |
 Myche1_769591 | GT2 | 1.55 | 1.21 | 1.27 | 1.40 |
 Myche1_753672 | PL1 | 1.28 | 1.44 | 1.08 | 1.41 |
 Myche1_707013 | PL3 | 1.20 | 1.06 | 1.12 | 1.23 |
Cluster 1b | |||||
 Myche1_689250 | GH10-CBM1 | 2.60 | 3.17 | 1.39 | 2.42 |
 Myche1_710754 | GH18 | 3.66 | 2.42 | 1.56 | 2.53 |
 Myche1_689342 | GH43 | 3.46 | 3.57 | 1.43 | 1.72 |
 Myche1_709100 | GH43 | 2.83 | 2.66 | 1.03 | 1.15 |
 Myche1_750857 | GH43-CBM35 | 2.22 | 2.12 | 1.13 | 1.10 |
Cluster 1c | |||||
 Myche1_743163 | CE5-CBM1 | 2.41 | 2.16 | 3.37 | 2.92 |