Table 3 Selected genes overexpressed in performing inocula
Gene | Description | FCa |
|---|---|---|
Fatty acid metabolism | ||
 TES1 | Peroxisomal acyl-CoA thioesterase, involved in fatty acid oxidation | 5.0 |
 PXA2 | Peroxisomal ATP-binding cassette transporter | 2.7 |
 OLE1 | Fatty acid desaturase, required for proper mitochondrial functioning | 2.6 |
 ETR1 | Thioester reductase, required for proper mitochondrial functioning | 2.2 |
General cellular metabolism | ||
 TDH3 | Glyceraldehyde-3-phosphate dehydrogenase | 8.2 |
 DFR1 | Dihydrofolate reductase, involved in tetrahydrofolate synthesis | 4.3 |
 ALD3/ALD2 | Aldehyde dehydrogenase | 4.2 |
 PDC6/PDC1 | Pyruvate decarboxylase | 4.0 |
 FDH1 | Formate dehydrogenase | 3.8 |
 TKL1/TKL2 | Transketolase | 3.6 |
 ASN1 | Asparagine synthetase | 3.1 |
 ARO80 | Transcriptional activator for aromatic amino acid catabolism. | 2.9 |
 ADH1 | Alcohol dehydrogenase | 2.9 |
Membrane/cell wall associated | ||
 PUN1 | Plasma membrane protein | 5.2 |
 HES1 | Implied regulator of ergosterol synthesis | 4.3 |
 PIR1 | Glycosylated cell wall protein, required for Apn1p mitochondrial translocation | 2.3 |
Transport | ||
 SEC27 | Protein in the COPI coatomer | 4.6 |
 ATG20 | Sorting nexin required for cytoplasm to vacuole targeting | 4.4 |
 CHS5 | Exomer complex component | 4.4 |
 CCC2 | Copper transporting P-type ATPase | 3.5 |
 FLC1 | Putative FAD transporter | 3.4 |
 PCA1 | Cadmium transporting P-type ATPase | 2.9 |
 SUL1 | High affinity sulfate permease | 2.9 |
 SEC22 | R-SNARE protein | 2.6 |
 GYP7 | GTPase-activating protein | 2.6 |
 PDR10 | ATP-binding cassette (ABC) transporter, multidrug transporter | 2.6 |
 SGE1 | Plasma membrane multidrug transporter | 1.9 |
Mitochondria associated | ||
 MRM2 | Mitochondrial O-ribose methyltransferase | 4.6 |
 YNL195C | Unknown function, part of the mitochondrial proteome | 4.1 |
 RPO41 | Mitochondrial RNA polymerase | 3.7 |
 FMP48 | Unknown function, part of the mitochondrial proteome | 3.7 |
 MSH1 | MutS Homologue involved in mitochondrial DNA repair | 3.4 |
 AEP2 | Mitochondrial protein involved in translation of OLI1 mRNA | 3.4 |
 YKL187C | Unknown function, part of the mitochondrial proteome | 2.8 |
 YNL208W | Unknown function, part of the mitochondrial proteome | 2.8 |
 MKS1 | Pleiotropic transcriptional regulator, involved in retrograde signaling | 2.7 |
 APJ1 | Chaperone protein involved in SUMO-mediated protein degradation | 2.7 |
 MIP1 | Mitochondrial DNA polymerase | 2.6 |
 MSC1 | Unknown function, part of the mitochondrial proteome | 2.5 |
 PUT1 | Proline oxidase | 2.5 |
 FMP16 | Unknown function, part of the mitochondrial proteome | 2.5 |
 CYB2 | Cytochrome b2 | 2.3 |
 YNL200C | NADHX epimerase | 2.0 |
 DLD3 | d-Lactate dehydrogenase, part of the retrograde regulon | 2.0 |
DNA stress response | ||
 IWR1 | RNA Pol II transport factor, relocates to cytoplasm upon DNA stress | 4.4 |
 ENO1 | Enolase I, converts 2-phosphoglycerate to phosphoenolpyruvate | 2.7 |
 TFS1 | Inhibits carboxypeptidase Y and Ira2p | 2.4 |
 TPS2 | Phosphatase involved in synthesis of trehalose | 2.0 |
Oxidative stress response | ||
 CTT1 | Cytosolic catalase T | 3.7 |
 GTT1 | Glutathione transferase | 2.7 |
 GAD1 | Glutamate decarboxylase | 2.1 |
 AHP1 | Thiol-specific peroxiredoxin | 2.1 |