Skip to main content

Table 1 Strains used in this study

From: Regulation of acetate tolerance by small ORF-encoded polypeptides modulating efflux pump specificity in Methylomonas sp. DH-1

Strain

Description

Genotype

References

Methylomonas sp. DH-1

Wild-type strain

 

[54]

JHM15

watR operon deletion in DH-1

DH-1 Δ(watR-smtM-rstM)::KanR

This study

JHM16

fliE deletion in DH-1

DH-1 ΔfliE::kanR

This study

JHM161

watS1 overexpression in DH-1

DH-1 ΔfliE:: PmxaF-watS1-TrrnB-KanR

This study

JHM162

watS2 overexpression in DH-1

DH-1 ΔfliE:: PmxaF-watS2-TrrnB-KanR

This study

JHM163

watS3 overexpression in DH-1

DH-1 ΔfliE:: PmxaF-watS3-TrrnB-KanR

This study

JHM164

watS4 overexpression in DH-1

DH-1 ΔfliE:: PmxaF-watS4-TrrnB-KanR

This study

JHM165

watS5 overexpression in DH-1

DH-1 ΔfliE:: PmxaF-watS5-TrrnB-KanR

This study

JHM17

watS1 deletion in DH-1

DH-1 ΔwatS1::KanR

This study

JHM18

WatABO pump deletion in DH-1

DH-1 Δ(watPAB-watO)::AmpR

This study

JHM181

fliE deletion in JHM18

JHM18 ΔfliE::KanR

This study

JHM182

watS1 deletion in JHM18

JHM18 ΔwatS1::KanR

This study

JHM183

watS1 overexpression in JHM18

JHM18 ΔfliE::PmxaF-watS1-TrrnB-KanR

This study

JHM80

Evolved strain from DH-1

 

[4]

JHM82

watR operon deletion in JHM80

JHM80 Δ(watR-smtM-rstM)::KanR

[4]

JHM87

WatABO pump deletion in JHM80

JHM80 Δ(watPAB-watO)::KanR

This study

JHM16WF

watR-Flag overexpression in DH-1

DH-1 ΔfliE::PEFTu-watR-Flag-TrrnB-KanR

This study

JHM80WF

watR-Flag tagging in JHM80

JHM80 watR-Flag-TrrnB-KanR

This study

JHM161T

watS1-T7 overexpression in DH-1

DH-1 ΔfliE::PmxaF-watS1- T7-TrrnB-KanR

This study