Skip to main content

Table 7 Protein identification by mass spectrometry from Aspergillus niger supernatants grown for 24 hours on steam-exploded sugarcane bagasse

From: Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse

Sample label Protein name Gene locus NCBI GEO accession number Theoretical
molecular mass (kDa)
Score Sequence coverage (%) GE level
(log2 Cy5/Cy3)
1 β-glucosidase An18g03570 [GEO:215260053] 90 107 16 2.56 ± 0.03
1 Xylosidase (XlnD) An01g09960 [GEO:145230215] 87 176 18 2.10 ± 0.05
2 Glucan 1,4-α-glucosidase (GlaA) An03g06550 [GEO:145235763] 68 264 40 ND
2 Hypothetical protein An14g02470 [GEO:145249068] 65 63 15 ND
3 1,4-β-D-glucan cellobiohydrolase B (CbhB) An01g11660 [GEO:145235763] 56 264 40 6.59 ± 0.15
3 Acid α-amylase An11g03340 [GEO:145243632] 55 63 13 ND
3 α-N-arabinofuranosidase B An15g02300 [GEO:1168267] 52 256 23 7.94 ± 0.10
4 1,4-β-D-glucan cellobiohydrolase A An07g09330 [GEO:74698499] 48 158 12 3.89 ± 0.20
4 Candidate cellulose 1,4-β-cellobiosidase II (Cbh2) An12g02220 [GEO:145246118] 48 89 18 4.37 ± 0.05
5 Aspergillopepsin A An14g04710 [GEO:1709632] 41 126 23 5.83 ± 0.09
6 Endo-1,4-β-xylanase A precursor An03g00940 [GEO:145234695] 35 219 67 3.64 ± 0.06
6 1,4-β-D-arabinoxylan arabinofuranohydrolase (AxhA) An03g00960 [GEO:145234699] 35 127 37 4.03 ± 0.01
6 Endo-1,4-β-xylanase C An03g00940 [GEO:292495635] 35 230 57 3.64 ± 0.06
6 Protease B An14g04710 [GEO:1585070] 34 136 38 5.83 ± 0.09
7 Chain A, crystal structure of ferulic acid esterase An09g00120 [GEO:48425840] 28 105 40 6.17 ± 0.99
8 Endoglucanase A An14g02760 [GEO:289595328] 25 99 22 4.36 ± 0.30
9 Xylanase An01g00780 [GEO:13242071] 11 99 78 8.29 ± 0.04
  1. NCBI GEO = National Center for Biotechnology Information Gene Expression Omnibus; kDa = kilodaltons; GE = gene expression; log2 Cy5/Cy3 ratio = base 2 logarithm ratio of cyanine 5 to cyanine 3; ND = no data. Data presented in right-hand column are means ± SD. Score column refers to Mowse scoring algorithm [45].